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L3_063_000G1_scaffold_212

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_212_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(145..1044)
DNA (900bp) protein (300aa)
Glutamate formimidoyltransferase {ECO:0000313|EMBL:EJF38923.1}; EC=2.1.2.5 {ECO:0000313|EMBL:EJF38923.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formimidoyltransferase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H124_9CLOT
L3_063_000G1_scaffold_212_2
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1234..4314
DNA (3081bp) protein (1027aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX13_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK98428.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_063_000G1_scaffold_212_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4618..5868
DNA (1251bp) protein (417aa)
ESS family glutamate:sodium symporter n=2 Tax=Clostridium symbiosum RepID=E7GKA8_CLOSY
Sodium/glutamate symporter {ECO:0000313|EMBL:EHF04615.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
sodium--glutamate symport carrier (gltS)
L3_063_000G1_scaffold_212_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5931..6842
DNA (912bp) protein (304aa)
Glutamate formiminotransferase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZIK8_9FIRM
Glutamate formiminotransferase {ECO:0000313|EMBL:EGJ46504.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative glutamate formimidoyltransferase
L3_063_000G1_scaffold_212_5
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6873..7499
DNA (627bp) protein (209aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:BAK98422.1}; EC=3.5.4.9 {ECO:0000313|EMBL:BAK98422.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX07_OSCVS
L3_063_000G1_scaffold_212_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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7581..8174
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SN62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46392.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_063_000G1_scaffold_212_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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8229..9902
DNA (1674bp) protein (558aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCF5_9FIRM
L3_063_000G1_scaffold_212_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10201..11070
DNA (870bp) protein (290aa)
Bifunctional protein FolD n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FDL0_9CLOT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_063_000G1_scaffold_212_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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11067..11897
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZIK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14405.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Formate/nitrite family of transporters
L3_063_000G1_scaffold_212_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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11894..13162
DNA (1269bp) protein (423aa)
folC; folylpolyglutamate synthase (EC:6.3.2.17)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46500.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_063_000G1_scaffold_212_11
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13364..13897
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037AF0F8
Folate transporter {ECO:0000313|EMBL:KHS58452.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
folT; Folate ECF transporter S component FolT
L3_063_000G1_scaffold_212_12
unknown

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comp(13978..14118)
DNA (141bp) protein (47aa)

This feature has no annotations

L3_063_000G1_scaffold_212_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14261..14968
DNA (708bp) protein (236aa)
Putative response regulator MprA n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BGH1_9CLOT
Putative response regulator MprA {ECO:0000313|EMBL:ERI77194.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
response regulator receiver
L3_063_000G1_scaffold_212_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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14965..16260
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=G9YX65_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_063_000G1_scaffold_212_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16543..17688
DNA (1146bp) protein (382aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3)
Oxaloacetate decarboxylase, beta subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN1_9FIRM
Oxaloacetate decarboxylase, beta subunit {ECO:0000313|EMBL:EGJ47759.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_063_000G1_scaffold_212_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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17715..17843
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47760.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_063_000G1_scaffold_212_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(17893..18162)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZG16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13365.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_063_000G1_scaffold_212_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18390..18785
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47515.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative peptidoglycan binding domain protein
L3_063_000G1_scaffold_212_19
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

18795..20042
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15501.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
iron transporter FeoB
L3_063_000G1_scaffold_212_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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20039..20620
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47513.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Putative peptidoglycan-binding domain-containing protein
L3_063_000G1_scaffold_212_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21245..22477)
DNA (1233bp) protein (411aa)
Hydrogenase subunit (Ferredoxin) n=1 Tax=Clostridium sp. D5 RepID=F0Z3H4_9CLOT
Hydrogenase subunit (Ferredoxin) {ECO:0000313|EMBL:EGB91238.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hydrogenase large subunit domain-containing protein
L3_063_000G1_scaffold_212_22
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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22753..24786
DNA (2034bp) protein (678aa)
Sulfatase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I314_CLOCE
sulfatase
Tax=BJP_IG2103_Clostridiales_50_15
L3_063_000G1_scaffold_212_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24854..25390)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46945.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rbr1; rubrerythrin
L3_063_000G1_scaffold_212_24
unknown

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comp(26023..26205)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_063_000G1_scaffold_212_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26205..27686)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46177.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
FAD dependent oxidoreductase
L3_063_000G1_scaffold_212_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28677..29942)
DNA (1266bp) protein (422aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hutI; imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEK8_9FIRM
L3_063_000G1_scaffold_212_27
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30008..31426)
DNA (1419bp) protein (473aa)
Na+/solute symporter n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GC01_9FIRM
Na+/solute symporter {ECO:0000313|EMBL:EEG78736.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
Na+/proline symporter
L3_063_000G1_scaffold_212_28
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31457..31867)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Fusobacterium nucleatum subsp. polymorphum ATCC 10953 RepID=A5TSZ3_FUSNP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ75706.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L3_063_000G1_scaffold_212_29
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31864..33078)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Bacillus acidiproducens RepID=UPI0003745994
PF04412 family protein {ECO:0000313|EMBL:CDE13631.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
L3_063_000G1_scaffold_212_30
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(33106..35136)
DNA (2031bp) protein (677aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hutU; urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YFN4_9FIRM
Displaying items 1-30 of 95 in total

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