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L3_063_000G1_scaffold_228

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Displaying items 1-30 of 195 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_228_1
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(99..983)
DNA (885bp) protein (295aa)
Xap operon transcriptional regulator n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY20_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35832.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
DNA-binding transcriptional activator XapR
L3_063_000G1_scaffold_228_2
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1034..2290)
DNA (1257bp) protein (419aa)
Xanthosine permease n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY21_ESCHE
Xanthosine permease {ECO:0000313|EMBL:GAB50802.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
xanthosine permease
L3_063_000G1_scaffold_228_3
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2346..3179)
DNA (834bp) protein (278aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Purine nucleoside phosphorylase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY22_ESCHE
xanthosine phosphorylase
L3_063_000G1_scaffold_228_4
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3353..3676
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8ADI7_CITK8
hypothetical protein
FlxA protein {ECO:0000313|EMBL:KGY19591.1}; Uncharacterized protein {ECO:0000313|EMBL:CDZ82345.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
L3_063_000G1_scaffold_228_5
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3667..4608)
DNA (942bp) protein (314aa)
Putative LysR family transcriptional regulator YfeR n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY24_ESCHE
Putative LysR family transcriptional regulator YfeR {ECO:0000313|EMBL:GAB50805.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
LysR family transcriptional regulator
L3_063_000G1_scaffold_228_6
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4695..5693
DNA (999bp) protein (333aa)
Putative BASS family transporter YfeH n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY25_ESCHE
Putative BASS family transporter YfeH {ECO:0000313|EMBL:GAB50806.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_000G1_scaffold_228_7
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5696..5908)
DNA (213bp) protein (71aa)
Putative uncharacterized protein ypeB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY26_ESCHE
hypothetical protein
Putative uncharacterized protein ypeB {ECO:0000313|EMBL:GAB50807.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_000G1_scaffold_228_8
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5910..7928)
DNA (2019bp) protein (673aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY27_ESCHE
L3_063_000G1_scaffold_228_9
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7998..8951)
DNA (954bp) protein (318aa)
Cell division protein ZipA homolog n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY28_ESCHE
Cell division protein ZipA homolog {ECO:0000256|HAMAP-Rule:MF_00509, ECO:0000256|SAAS:SAAS00054614}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
zipA; cell division protein ZipA
L3_063_000G1_scaffold_228_10
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9180..9941
DNA (762bp) protein (254aa)
Protein CysZ n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY29_ESCHE
Sulfate transporter CysZ {ECO:0000256|HAMAP-Rule:MF_00468}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
cysZ; sulfate transport protein CysZ
L3_063_000G1_scaffold_228_11
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10190..10975
DNA (786bp) protein (262aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
cysK; cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY30_ESCHE
L3_063_000G1_scaffold_228_12
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11356..11613
DNA (258bp) protein (86aa)
Phosphotransferase system, phosphocarrier protein HPr n=2 Tax=Enterobacteriaceae RepID=E3G9J6_ENTLS
PTS system phosphocarrier protein HPr
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:ADO47604.1}; TaxID=701347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter lignolyticus (strain SCF1).;"
L3_063_000G1_scaffold_228_13
unknown

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11657..11752
DNA (96bp) protein (32aa)

This feature has no annotations

L3_063_000G1_scaffold_228_14
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11821..13314
DNA (1494bp) protein (498aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY32_ESCHE
phosphoenolpyruvate-protein phosphotransferase
L3_063_000G1_scaffold_228_15
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13320..13823
DNA (504bp) protein (168aa)
Glucose-specific phosphotransferase system enzyme IIA component n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY33_ESCHE
Glucose-specific phosphotransferase system enzyme IIA component {ECO:0000313|EMBL:GAB50814.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
PTS system glucose-specific transporter subunit IIA
L3_063_000G1_scaffold_228_16
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13878..14723)
DNA (846bp) protein (282aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
pdxK; pyridoxal kinase (EC:2.7.1.35)
Pyridoxine kinase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY35_ESCHE
L3_063_000G1_scaffold_228_17
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14777..15688)
DNA (912bp) protein (304aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
cysM; cysteine synthase B (EC:2.5.1.47)
Cysteine synthase B n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY36_ESCHE
L3_063_000G1_scaffold_228_18
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15758..16843)
DNA (1086bp) protein (362aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
cysA; sulfate/thiosulfate transporter subunit (EC:3.6.3.25)
Sulfate/thiosulfate ABC transporter ATP-binding protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY37_ESCHE
L3_063_000G1_scaffold_228_19
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16833..17708)
DNA (876bp) protein (292aa)
Sulfate/thiosulfate ABC transporter permease protein CysW n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY38_ESCHE
CysW protein {ECO:0000313|EMBL:KIU35814.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
sulfate ABC transporter permease
L3_063_000G1_scaffold_228_20
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17708..18541)
DNA (834bp) protein (278aa)
Sulfate/thiosulfate ABC transporter permease protein CysU n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY39_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35813.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
sulfate/thiosulfate transporter subunit
L3_063_000G1_scaffold_228_21
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18541..19554)
DNA (1014bp) protein (338aa)
Thiosulfate ABC transporter substrate binding protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY40_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35812.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
thiosulfate transporter subunit
L3_063_000G1_scaffold_228_22
Cedecea neteri, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19800..20699)
DNA (900bp) protein (300aa)
LysR family transcripitonal regulator n=1 Tax=Dickeya zeae RepID=UPI00038117CF
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AIR69910.1}; TaxID=158822 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea neteri.;"
L3_063_000G1_scaffold_228_23
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20963..22243
DNA (1281bp) protein (427aa)
Oxalate/formate antiporter n=1 Tax=Dickeya dadantii (strain 3937) RepID=E0SNC7_DICD3
oxalate/formate antiporter
Oxalate/formate antiporter {ECO:0000313|EMBL:ADN00678.1}; TaxID=198628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)).;"
L3_063_000G1_scaffold_228_24
Cedecea neteri, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22283..24031
DNA (1749bp) protein (583aa)
oxalyl-CoA decarboxylase (EC:4.1.1.8)
Oxalyl-CoA decarboxylase {ECO:0000313|EMBL:AIR69912.1}; EC=4.1.1.8 {ECO:0000313|EMBL:AIR69912.1};; TaxID=158822 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea neteri.;"
UPI00039B8A59 related cluster n=1 Tax=unknown RepID=UPI00039B8A59
L3_063_000G1_scaffold_228_25
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24047..25324
DNA (1278bp) protein (426aa)
formyl-coenzyme A transferase (EC:2.8.3.16)
Formyl-CoA:oxalate CoA-transferase {ECO:0000256|HAMAP-Rule:MF_00742}; Short=FCOCT {ECO:0000256|HAMAP-Rule:MF_00742};; EC=2.8.3.16 {ECO:0000256|HAMAP-Rule:MF_00742};; Formyl-coenzyme A transferase {ECO:0000256|HAMAP-Rule:MF_00742}; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain Ech703).;"
Formyl-CoA transferase n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6C979_DICDC
L3_063_000G1_scaffold_228_26
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25328..25714
DNA (387bp) protein (129aa)
UPI0003D6DBCF related cluster n=1 Tax=unknown RepID=UPI0003D6DBCF
PAS/PAC domain-containing protein
PAS/PAC domain protein {ECO:0000313|EMBL:ADN00681.1}; TaxID=198628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)).;"
L3_063_000G1_scaffold_228_27
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25831..27078
DNA (1248bp) protein (416aa)
Formyl-CoA:oxalate CoA-transferase {ECO:0000256|HAMAP-Rule:MF_00742}; Short=FCOCT {ECO:0000256|HAMAP-Rule:MF_00742};; EC=2.8.3.16 {ECO:0000256|HAMAP-Rule:MF_00742};; Formyl-coenzyme A transferase {ECO:0000256|HAMAP-Rule:MF_00742}; TaxID=198628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)).;"
Probable formyl-coenzyme A transferase n=1 Tax=Dickeya dadantii (strain 3937) RepID=E0SND1_DICD3
formyl-coenzyme A transferase
L3_063_000G1_scaffold_228_28
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27133..28032)
DNA (900bp) protein (300aa)
Putative uncharacterized protein yfeX n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY41_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35811.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
yfeX; protein YfeX
L3_063_000G1_scaffold_228_29
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28133..28705)
DNA (573bp) protein (191aa)
Putative uncharacterized protein yfeY n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY42_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35810.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_000G1_scaffold_228_30
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28768..29205)
DNA (438bp) protein (146aa)
Putative uncharacterized protein yfeZ n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UY43_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35809.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Protein of unknown function (DUF2919)
Displaying items 1-30 of 195 in total

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