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L3_063_000G1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_244_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..2271)
DNA (2271bp) protein (757aa)
TQXA domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0B4_9FIRM
TQXA domain protein {ECO:0000313|EMBL:EDM98264.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_063_000G1_scaffold_244_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2466..3230)
DNA (765bp) protein (255aa)
Sortase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLM5_9FIRM
Sortase {ECO:0000313|EMBL:EHO23030.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_063_000G1_scaffold_244_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3227..4108)
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54235.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_063_000G1_scaffold_244_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4447..5316)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54237.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_063_000G1_scaffold_244_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5340..5957)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54238.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_063_000G1_scaffold_244_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5960..6346)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23035.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_063_000G1_scaffold_244_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6354..7748)
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23036.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_063_000G1_scaffold_244_8
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7748..8053)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MF32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66462.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_063_000G1_scaffold_244_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8050..8625)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23038.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_063_000G1_scaffold_244_10
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8785..9588)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M645_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66465.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L3_063_000G1_scaffold_244_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9602..10561)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23040.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L3_063_000G1_scaffold_244_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10571..11026)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23043.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_063_000G1_scaffold_244_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11037..12146)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23044.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_063_000G1_scaffold_244_14
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12227..12637)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IIL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS21656.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_063_000G1_scaffold_244_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12643..14436)
DNA (1794bp) protein (598aa)
ParB-like partition protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54251.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
parB-like partition protein
L3_063_000G1_scaffold_244_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14498..15442)
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54253.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_063_000G1_scaffold_244_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16050..17030)
DNA (981bp) protein (327aa)
Sel1 repeat protein n=3 Tax=Oscillibacter RepID=U2QS14_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:ERK65725.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_063_000G1_scaffold_244_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17119..17856)
DNA (738bp) protein (246aa)
Sel1 repeat protein (Fragment) n=2 Tax=Oscillibacter RepID=U2QSQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK61335.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_063_000G1_scaffold_244_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17844..18263)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q9Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK61334.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_063_000G1_scaffold_244_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18502..18918)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2S1F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK61332.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Sugar-specific transcriptional regulator TrmB.
L3_063_000G1_scaffold_244_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18915..19124)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27682.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_063_000G1_scaffold_244_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19121..19636)
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QS07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK65720.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_063_000G1_scaffold_244_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19633..20022)
DNA (390bp) protein (130aa)
Sigma-70, region 4 n=2 Tax=Oscillibacter RepID=U2Q9L7_9FIRM
Sigma-70, region 4 {ECO:0000313|EMBL:ERK65718.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_063_000G1_scaffold_244_24
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20333..23728)
DNA (3396bp) protein (1132aa)
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
Type III restriction protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G8W5_9CLOT
Type III restriction protein {ECO:0000313|EMBL:CCY09327.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_063_000G1_scaffold_244_25
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23799..24173)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LYL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63421.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_063_000G1_scaffold_244_26
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24193..25356)
DNA (1164bp) protein (388aa)
Restriction endonuclease S subunits (EC:3.1.21.3)
Type I restriction modification DNA specificity domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LMF7_9FIRM
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EET58183.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_063_000G1_scaffold_244_27
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25356..26852)
DNA (1497bp) protein (499aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Type I restriction enzyme M protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M790_9FIRM
Type I restriction enzyme M protein {ECO:0000313|EMBL:EOS66703.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_063_000G1_scaffold_244_28
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(26859..27917)
DNA (1059bp) protein (353aa)
Uncharacterized conserved protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LL82_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDB86620.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_063_000G1_scaffold_244_29
unknown

Not on your lists

28142..28369
DNA (228bp) protein (76aa)

This feature has no annotations

L3_063_000G1_scaffold_244_30
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29006..39511)
DNA (10506bp) protein (3502aa)
Cell wall-binding protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NJC4_9FIRM
Cell wall-binding protein {ECO:0000313|EMBL:CCZ03878.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Ig family protein
Displaying items 1-30 of 99 in total

View Taxonomy