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L3_063_000G1_scaffold_280

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Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_280_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..5589)
DNA (5589bp) protein (1863aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JH88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19146.1}; Flags: Fragment;; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_280_2
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5776..6291
DNA (516bp) protein (172aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25419.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_063_000G1_scaffold_280_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6370..6873)
DNA (504bp) protein (168aa)
Hydrolase, NUDIX family n=5 Tax=Clostridiales RepID=A5KLW1_9FIRM
Mutator MutT protein {ECO:0000313|EMBL:EFV19144.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Isopentenyldiphosphate isomerase
L3_063_000G1_scaffold_280_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6950..8794)
DNA (1845bp) protein (615aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A5KLW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25417.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ABC-type multidrug transport system, ATPase and permease components
L3_063_000G1_scaffold_280_5
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8787..10520)
DNA (1734bp) protein (578aa)
ATP-binding cassette n=4 Tax=Clostridiales RepID=E5XHU1_9FIRM
ATP-binding cassette {ECO:0000313|EMBL:EFV19142.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L3_063_000G1_scaffold_280_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10522..11145)
DNA (624bp) protein (208aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Endonuclease III n=5 Tax=Clostridiales RepID=A5KLW4_9FIRM
hypothetical protein
L3_063_000G1_scaffold_280_7
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11164..11331)
DNA (168bp) protein (56aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QGJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19140.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_063_000G1_scaffold_280_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11554..13308)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5Q9Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25413.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
peptidase S8/S53 subtilisin kexin sedolisin
L3_063_000G1_scaffold_280_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13512..14735)
DNA (1224bp) protein (408aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=5 Tax=Clostridiales RepID=A5KLW8_9FIRM
L3_063_000G1_scaffold_280_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14946..15962
DNA (1017bp) protein (339aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDK24494.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDK24494.1};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Glycosyltransferase, group 2 family protein n=5 Tax=Clostridiales RepID=A5KLW9_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L3_063_000G1_scaffold_280_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16685..17155
DNA (471bp) protein (157aa)
RNA polymerase sigma factor SigX n=4 Tax=Clostridiales RepID=E5XHT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25410.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
putative RNA polymerase sigma factor
L3_063_000G1_scaffold_280_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17148..17603
DNA (456bp) protein (152aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KLX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19135.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_280_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17726..18559)
DNA (834bp) protein (278aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=4 Tax=Clostridiales RepID=E5XHT3_9FIRM
L3_063_000G1_scaffold_280_14
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18659..19606)
DNA (948bp) protein (316aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87048.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Putative GTPases (G3E family)
L3_063_000G1_scaffold_280_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19689..20885)
DNA (1197bp) protein (399aa)
Cobalamin biosynthesis protein n=3 Tax=Clostridiales RepID=E5XHT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25406.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Putative GTPases (G3E family)
L3_063_000G1_scaffold_280_16
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20910..21662)
DNA (753bp) protein (251aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=5 Tax=Clostridiales RepID=A5KLX6_9FIRM
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:EFV19131.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_063_000G1_scaffold_280_17
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21765..22547)
DNA (783bp) protein (261aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=4 Tax=Clostridiales RepID=E5XHS9_9FIRM
L3_063_000G1_scaffold_280_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22556..23005)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=5 Tax=Clostridiales RepID=A5KLX8_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
transcriptional regulator NrdR
L3_063_000G1_scaffold_280_19
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23064..23318)
DNA (255bp) protein (85aa)
Sporulation protein, YlmC/YmxH family n=5 Tax=Clostridiales RepID=A5KLX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87053.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
sporulation protein, YlmC/YmxH family
L3_063_000G1_scaffold_280_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23487..23861
DNA (375bp) protein (125aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25401.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_063_000G1_scaffold_280_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23929..25503
DNA (1575bp) protein (525aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5Q9M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25400.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Predicted integral membrane protein
L3_063_000G1_scaffold_280_22
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25650..26459
DNA (810bp) protein (270aa)
Hemolysin III n=5 Tax=Clostridiales RepID=E5XHS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87056.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
channel protein, hemolysin III family
L3_063_000G1_scaffold_280_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26541..27284)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5Q9Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25398.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Transcriptional regulators of sugar metabolism
L3_063_000G1_scaffold_280_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27515..29431)
DNA (1917bp) protein (639aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=6 Tax=root RepID=A5KLY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25397.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L3_063_000G1_scaffold_280_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29643..30551)
DNA (909bp) protein (303aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=5 Tax=Clostridiales RepID=A5KLY7_9FIRM
L3_063_000G1_scaffold_280_26
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30812..31387)
DNA (576bp) protein (192aa)
HD domain protein n=5 Tax=Clostridiales RepID=A5KLY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25395.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
metal dependent phosphohydrolase
L3_063_000G1_scaffold_280_27
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31576..32307
DNA (732bp) protein (244aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=5 Tax=Clostridiales RepID=A5KLY9_9FIRM
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EFV19120.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_063_000G1_scaffold_280_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32437..33306
DNA (870bp) protein (290aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5Q9X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25393.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_063_000G1_scaffold_280_29
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33414..33695)
DNA (282bp) protein (94aa)
Putative septation protein SpoVG n=5 Tax=Clostridiales RepID=A5KLZ2_9FIRM
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Uncharacterized protein, involved in the regulation of septum location
L3_063_000G1_scaffold_280_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33747..34844)
DNA (1098bp) protein (366aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KLZ3_9FIRM
Displaying items 1-30 of 75 in total

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