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L3_063_000G1_scaffold_284

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_284_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..951
DNA (951bp) protein (317aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LWJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36888.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_063_000G1_scaffold_284_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1375..1824
DNA (450bp) protein (150aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LWJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84740.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_063_000G1_scaffold_284_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1858..4068)
DNA (2211bp) protein (737aa)
LPXTG-domain-containing protein cell wall anchor domain n=2 Tax=Firmicutes RepID=H1B2K0_9FIRM
LPXTG cell wall anchor domain protein {ECO:0000313|EMBL:EQJ55792.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cell wall/surface repeat-containing protein
L3_063_000G1_scaffold_284_4
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4523..5593)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1B2K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30776.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
amidohydrolase
L3_063_000G1_scaffold_284_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5590..6684)
DNA (1095bp) protein (365aa)
ABC transporter, ATP-binding protein n=5 Tax=Firmicutes RepID=E4LWJ7_9CLOT
ABC transporter family protein {ECO:0000313|EMBL:EQJ55795.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC transporter, ATPase component
L3_063_000G1_scaffold_284_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6697..7533)
DNA (837bp) protein (279aa)
ABC transporter, permease protein n=6 Tax=Firmicutes RepID=E4LWJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84736.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
binding-protein-dependent transporters inner membrane component
L3_063_000G1_scaffold_284_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7535..8410)
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=4 Tax=Firmicutes RepID=E4LWJ9_9CLOT
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQJ55797.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type sugar transport system permease subunit
L3_063_000G1_scaffold_284_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8467..9747)
DNA (1281bp) protein (427aa)
ABC transporter, solute-binding protein n=5 Tax=Firmicutes RepID=E4LWK0_9CLOT
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EQJ55798.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
extracellular solute-binding protein
L3_063_000G1_scaffold_284_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9793..11127)
DNA (1335bp) protein (445aa)
alpha-galactosidase (EC:3.2.1.22)
Family 4 glycosyl hydrolase n=4 Tax=Firmicutes RepID=E4LWK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84060.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_063_000G1_scaffold_284_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11304..12314
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=6 Tax=Firmicutes RepID=E4LWK2_9CLOT
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:EQJ55800.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
LacI family transcriptional regulator
L3_063_000G1_scaffold_284_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12311..13279
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B2L2_9FIRM
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EQJ55801.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
BadF/BadG/BcrA/BcrD family ATPase
L3_063_000G1_scaffold_284_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13578..14702)
DNA (1125bp) protein (375aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Firmicutes RepID=E4LWK4_9CLOT
L3_063_000G1_scaffold_284_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14764..16848)
DNA (2085bp) protein (695aa)
Translation elongation factor G n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B2L4_9FIRM
Translation elongation factor G {ECO:0000313|EMBL:ENY84729.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
translation elongation factor G
L3_063_000G1_scaffold_284_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16861..17532)
DNA (672bp) protein (224aa)
Ankyrin repeat protein n=7 Tax=Firmicutes RepID=E4LWK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84728.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
FOG: Ankyrin repeat
L3_063_000G1_scaffold_284_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17936..18391
DNA (456bp) protein (152aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=G1VTR1_9FIRM
MarR family protein {ECO:0000313|EMBL:EQJ55807.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_063_000G1_scaffold_284_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18388..19023
DNA (636bp) protein (212aa)
HAD hydrolase, family IA, variant 3 n=7 Tax=Firmicutes RepID=E4LWK9_9CLOT
HAD hydrolase, family IA {ECO:0000313|EMBL:ENY84726.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
HAD family hydrolase
L3_063_000G1_scaffold_284_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19033..19845
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B2L8_9FIRM
Membrane protein {ECO:0000313|EMBL:KGJ52003.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_063_000G1_scaffold_284_18
unknown

Not on your lists

comp(19777..20118)
DNA (342bp) protein (114aa)

This feature has no annotations

L3_063_000G1_scaffold_284_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20236..21312
DNA (1077bp) protein (359aa)
Sporulation integral membrane protein YtvI n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B2L9_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EFR36863.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
sporulation integral membrane protein YtvI
L3_063_000G1_scaffold_284_20
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21433..21624
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B2M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30235.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_063_000G1_scaffold_284_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21987..22610)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B2M1_9FIRM
High molecular weight rubredoxin {ECO:0000313|EMBL:EQJ55815.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_063_000G1_scaffold_284_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22870..23361
DNA (492bp) protein (164aa)
RNA polymerase sigma factor SigV n=7 Tax=Firmicutes RepID=E4LWL5_9CLOT
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EQJ55816.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sigV2; RNA polymerase sigma factor SigV
L3_063_000G1_scaffold_284_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23358..24230
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B2M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84038.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_063_000G1_scaffold_284_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24230..25600
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B2M4_9FIRM
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EQJ55818.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
yjeA; extracellular DNase YjeA
L3_063_000G1_scaffold_284_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25608..25793)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LWL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36772.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_063_000G1_scaffold_284_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25921..27288
DNA (1368bp) protein (456aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B2M5_9FIRM
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EQJ55819.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
yjeA; polysaccharide deacetylase
L3_063_000G1_scaffold_284_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27363..27863
DNA (501bp) protein (167aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=G1VTQ2_9FIRM
Putative NADH dehydrogenase/NAD(P)H nitroreductase {ECO:0000313|EMBL:EQJ55820.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
nitroreductase
L3_063_000G1_scaffold_284_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28005..28484)
DNA (480bp) protein (160aa)
Glyoxalase family protein n=5 Tax=Firmicutes RepID=E4LWM1_9CLOT
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:EQJ55821.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
L3_063_000G1_scaffold_284_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28486..29403)
DNA (918bp) protein (306aa)
Asparaginase n=5 Tax=Firmicutes RepID=E4LWM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84028.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ansB; Isoaspartyl aminopeptidase
L3_063_000G1_scaffold_284_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29786..30736)
DNA (951bp) protein (317aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L-lactate dehydrogenase n=6 Tax=Firmicutes RepID=E4LWM3_9CLOT
ldh; L-lactate dehydrogenase
Displaying items 1-30 of 92 in total

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