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L3_063_000G1_scaffold_347

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Displaying items 1-30 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_347_1
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178..822)
DNA (645bp) protein (215aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030AC1A4
L3_063_000G1_scaffold_347_2
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(822..1769)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00036AE0D4
Uncharacterized protein {ECO:0000313|EMBL:EFH09631.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative dienelactone hydrolase
L3_063_000G1_scaffold_347_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2035..2922
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000305B8AE
cation efflux protein
Cation efflux protein {ECO:0000313|EMBL:BAF90557.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
L3_063_000G1_scaffold_347_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3145..3702)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D601E2
Hydrolase, NUDIX family {ECO:0000313|EMBL:EHM01542.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hydrolase
L3_063_000G1_scaffold_347_5
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3699..6626)
DNA (2928bp) protein (976aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
gcvP; glycine dehydrogenase (EC:1.4.4.2)
glycine dehydrogenase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E63455
L3_063_000G1_scaffold_347_6
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6634..7008)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003011F74
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
glycine cleavage system H protein
L3_063_000G1_scaffold_347_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7106..8221)
DNA (1116bp) protein (372aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00036AB2D8
glycine cleavage system T protein
L3_063_000G1_scaffold_347_8
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8597..9235
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000377C736
Uncharacterized protein {ECO:0000313|EMBL:EPX62631.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
L3_063_000G1_scaffold_347_9
unknown

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9232..9501
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DB881C
L3_063_000G1_scaffold_347_10
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9585..9854
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031D1F87
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ89567.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
hypothetical protein
L3_063_000G1_scaffold_347_11
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10474..10746
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F41597
Uncharacterized protein {ECO:0000313|EMBL:EMI54149.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
hypothetical protein
L3_063_000G1_scaffold_347_12
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10813..11055
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DF7EA7
Uncharacterized protein {ECO:0000313|EMBL:KES17842.1}; TaxID=1445514 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Gilliamella.;" source="Gilliamella apicola SCGC AB-598-I20.;"
hypothetical protein
L3_063_000G1_scaffold_347_13
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11039..11581)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F490F5
Ankyrin
Ankyrin {ECO:0000313|EMBL:AHJ63745.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
L3_063_000G1_scaffold_347_14
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11657..12247)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000366F848
Uncharacterized protein {ECO:0000313|EMBL:EHM01517.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
L3_063_000G1_scaffold_347_15
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12366..13379
DNA (1014bp) protein (338aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000381DB15
L3_063_000G1_scaffold_347_16
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13379..14362
DNA (984bp) protein (328aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D81C25
homoserine kinase
L3_063_000G1_scaffold_347_17
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14352..14843
DNA (492bp) protein (164aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
RNaseH ribonuclease n=1 Tax=Roseomonas sp. B5 RepID=UPI00036599A3
rnhA; ribonuclease H
L3_063_000G1_scaffold_347_18
unknown

Not on your lists

comp(14874..15392)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DB7F87
L3_063_000G1_scaffold_347_19
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15489..16028)
DNA (540bp) protein (180aa)
molybdopterin biosynthesis protein B n=1 Tax=Roseomonas sp. B5 RepID=UPI00031811FC
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
moaB; molybdenum cofactor biosynthesis protein B
L3_063_000G1_scaffold_347_20
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16106..17317)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D372B8
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJE50404.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
L3_063_000G1_scaffold_347_21
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17314..17865)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00035CC19E
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGM30358.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
GCN5-related N-acetyltransferase
L3_063_000G1_scaffold_347_22
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17964..18863
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E7E333
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR77128.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
LysR family transcriptional regulator
L3_063_000G1_scaffold_347_23
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18931..19893)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031C6929
Uncharacterized protein {ECO:0000313|EMBL:EHM01751.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Extra-cytoplasmic solute receptor
L3_063_000G1_scaffold_347_24
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19907..20626)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FCD275
putative ribulose-5-phosphate 4-epimerase-like epimerase
Putative ribulose-5-phosphate 4-epimerase-like epimerase {ECO:0000313|EMBL:AJE46760.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
L3_063_000G1_scaffold_347_25
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21072..22964)
DNA (1893bp) protein (631aa)
soluble lytic murein transglycosylase (EC:3.2.1.-)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00035F4342
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EHM03252.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
L3_063_000G1_scaffold_347_26
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23251..24201)
DNA (951bp) protein (317aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EFH10456.1}; EC=3.2.2.- {ECO:0000313|EMBL:EFH10456.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F45E6A
Uracil DNA glycosylase superfamily protein
L3_063_000G1_scaffold_347_27
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24297..26000
DNA (1704bp) protein (568aa)
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFH13355.1}; EC=1.5.5.1 {ECO:0000313|EMBL:EFH13355.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
electron transfer flavoprotein-ubiquinone oxidoreductase (EC:1.5.5.1)
electron transfer flavoprotein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FF97D7
L3_063_000G1_scaffold_347_28
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26404..27891)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000302D1F1
CHAD domain containing protein
Uncharacterized protein {ECO:0000313|EMBL:GAA07161.1}; TaxID=749388 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis NBRC 101654.;"
L3_063_000G1_scaffold_347_29
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28005..29786)
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E3E8E0
PTS system fructose-specific EIIBBC component {ECO:0000313|EMBL:EHL98688.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
fruA1; PTS system fructose-specific EIIBBC component [Includes: Fructose-specific phosphotransferase enzyme IIB component ; Fructose permease IIC component]
L3_063_000G1_scaffold_347_30
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29877..30827)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003003161
Putative 1-phosphofructokinase {ECO:0000313|EMBL:EHM02229.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
1-phosphofructokinase
Displaying items 1-30 of 180 in total

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