ggKbase home page

L3_063_000G1_scaffold_386

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_386_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1239)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MFP1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56294.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Endopolygalacturonase
L3_063_000G1_scaffold_386_2
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1293..3059)
DNA (1767bp) protein (589aa)
Cellulase (Glycosyl hydrolase family 5) n=1 Tax=Alistipes sp. HGB5 RepID=E4MFP2_9BACT
Cellulase (Glycosyl hydrolase family 5) {ECO:0000313|EMBL:EFR56256.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Endoglucanase
L3_063_000G1_scaffold_386_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3056..3928)
DNA (873bp) protein (291aa)
F5/8 type C domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MFP3_9BACT
F5/8 type C domain protein {ECO:0000313|EMBL:EFR56306.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
F5/8 type C domain.
L3_063_000G1_scaffold_386_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3958..5808)
DNA (1851bp) protein (617aa)
SusD family n=3 Tax=Alistipes RepID=D4ILM9_9BACT
SusD family.
SusD family {ECO:0000313|EMBL:CBK63841.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_063_000G1_scaffold_386_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5831..8923)
DNA (3093bp) protein (1031aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Alistipes RepID=I3YKB9_ALIFI
SusC/RagA family TonB-linked outer membrane protein
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AFL77437.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_000G1_scaffold_386_6
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9165..10097
DNA (933bp) protein (311aa)
Putative phosphohydrolase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKB8_ALIFI
phosphohydrolase
Putative phosphohydrolase {ECO:0000313|EMBL:AFL77436.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_000G1_scaffold_386_7
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10157..10993)
DNA (837bp) protein (279aa)
Metal-dependent hydrolase n=3 Tax=Alistipes RepID=D4ILM5_9BACT
Metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:CBK63837.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_063_000G1_scaffold_386_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11002..12993)
DNA (1992bp) protein (664aa)
Glycosyl hydrolase family 65 central catalytic domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MFP8_9BACT
Glycosyl hydrolase family 65 central catalytic domain protein {ECO:0000313|EMBL:EFR56234.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
trehalose/maltose hydrolase or phosphorylase
L3_063_000G1_scaffold_386_9
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13001..15016)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MFP9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56293.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
glycoside hydrolase
L3_063_000G1_scaffold_386_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15066..16175)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YKB4_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77432.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_000G1_scaffold_386_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16208..17770)
DNA (1563bp) protein (521aa)
N-acetyl-beta-hexosaminidase (EC:3.2.1.52)
Glycosyl hydrolase family 20, catalytic domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MFQ1_9BACT
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EFR56243.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_063_000G1_scaffold_386_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17817..20105)
DNA (2289bp) protein (763aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MFQ2_9BACT
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EFR56279.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_063_000G1_scaffold_386_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20140..22470)
DNA (2331bp) protein (777aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MFQ3_9BACT
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EFR56241.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
beta-glucosidase-like glycosyl hydrolase
L3_063_000G1_scaffold_386_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22481..24328)
DNA (1848bp) protein (616aa)
N-acetyl-beta-hexosaminidase (EC:3.2.1.52)
N-acetyl-beta-hexosaminidase n=2 Tax=Alistipes RepID=D4ILL8_9BACT
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EFR56295.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_063_000G1_scaffold_386_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24466..28599)
DNA (4134bp) protein (1378aa)
Signal transduction histidine kinase n=2 Tax=Alistipes RepID=D4ILL7_9BACT
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBK63829.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_063_000G1_scaffold_386_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28917..31151
DNA (2235bp) protein (745aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M9D7_9BACT
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EFR58416.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L3_063_000G1_scaffold_386_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31164..33101
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M9D8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58420.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
glycosyl hydrolase
L3_063_000G1_scaffold_386_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33122..34843
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKA6_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77424.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_000G1_scaffold_386_19
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35381..35833
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M9E0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58392.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_063_000G1_scaffold_386_20
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36128..37399)
DNA (1272bp) protein (424aa)
Site-specific recombinase, phage integrase family n=1 Tax=Alistipes sp. HGB5 RepID=E4M9E2_9BACT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFR58417.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
site-specific recombinase XerD
L3_063_000G1_scaffold_386_21
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37662..39254)
DNA (1593bp) protein (531aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Alistipes sp. HGB5 RepID=E4MBA6_9BACT
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFR57759.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
SusC/RagA family TonB-linked outer membrane protein
L3_063_000G1_scaffold_386_22
unknown

Not on your lists

comp(39208..39360)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_063_000G1_scaffold_386_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39451..40437)
DNA (987bp) protein (329aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Alistipes RepID=E4MBA5_9BACT
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CCZ76037.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Fe2+-dicitrate sensor membrane protein
L3_063_000G1_scaffold_386_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40620..41156)
DNA (537bp) protein (179aa)
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=3 Tax=Alistipes RepID=I3YKP0_ALIFI
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor Bacteroides expansion family 1 {ECO:0000313|EMBL:CCZ76036.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L3_063_000G1_scaffold_386_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41590..42867)
DNA (1278bp) protein (426aa)
Outer membrane efflux protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MBA3_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:EFR57771.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
outer membrane protein
L3_063_000G1_scaffold_386_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42867..45881)
DNA (3015bp) protein (1005aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MBA2_9BACT
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EFR57791.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
cation/multidrug efflux pump
L3_063_000G1_scaffold_386_27
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45914..46924)
DNA (1011bp) protein (337aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Alistipes RepID=E4MBA1_9BACT
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CCZ76033.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
RND family efflux transporter MFP subunit
L3_063_000G1_scaffold_386_28
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47077..47994
DNA (918bp) protein (306aa)
Transcriptional regulator, AraC family n=1 Tax=Alistipes sp. HGB5 RepID=E4MBA0_9BACT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFR57807.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA-binding domain-containing protein
L3_063_000G1_scaffold_386_29
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48018..48911)
DNA (894bp) protein (298aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKP5_ALIFI
DNA-binding domain-containing protein
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AFL77563.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_063_000G1_scaffold_386_30
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49183..50169
DNA (987bp) protein (329aa)
Alpha/beta superfamily hydrolase n=2 Tax=Alistipes RepID=I3YKP6_ALIFI
alpha/beta fold family hydrolase
Alpha/beta superfamily hydrolase {ECO:0000313|EMBL:CCZ76030.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Displaying items 1-30 of 54 in total

View Taxonomy