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L3_063_000G1_scaffold_395

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_395_1
Coccidioides immitis, Coccidioides, Onygenales, Eurotiomycetidae, Ascomycota, Fungi

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comp(1..213)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Coccidioides immitis (strain RS) RepID=J3KKT5_COCIM
Uncharacterized protein {ECO:0000313|EMBL:EAS36650.3}; TaxID=246410 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; mitosporic Onygenales; Coccidioides.;" source="Coccidioides immitis (strain RS) (Valley fever fungus).;"
hypothetical protein
L3_063_000G1_scaffold_395_2
Fretibacterium fastidiosum, Fretibacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(233..2899)
DNA (2667bp) protein (889aa)
Predicted ATPase n=1 Tax=Fretibacterium fastidiosum RepID=D4M7H6_9BACT
Predicted ATPase
Predicted ATPase {ECO:0000313|EMBL:CBL27821.1}; TaxID=651822 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Fretibacterium.;" source="Fretibacterium fastidiosum.;"
L3_063_000G1_scaffold_395_3
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2923..3360)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JKT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27601.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L3_063_000G1_scaffold_395_4
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

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comp(3413..4123)
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C9L301_9BACE
Tax=RBG_13_RIF03_48_7_curated
L3_063_000G1_scaffold_395_5
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4153..4749)
DNA (597bp) protein (199aa)
Putative TPR-repeat-containing protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5S5V0_9BACE
Putative TPR-repeat-containing protein {ECO:0000313|EMBL:CDC53304.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
hypothetical protein
L3_063_000G1_scaffold_395_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4942..6384
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C8P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23793.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_063_000G1_scaffold_395_7
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6609..6995)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L879_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX21571.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L3_063_000G1_scaffold_395_8
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6992..7756)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NQP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK31181.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L3_063_000G1_scaffold_395_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(7753..8139)
DNA (387bp) protein (129aa)
Sensor histidine kinase putative VirS n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBY1_9FIRM
Sensor histidine kinase putative VirS {ECO:0000313|EMBL:CDC46403.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_063_000G1_scaffold_395_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(8149..8670)
DNA (522bp) protein (174aa)
Response regulator putative VirR n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RM55_9FIRM
Response regulator putative VirR {ECO:0000313|EMBL:CDC46404.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
response regulator
L3_063_000G1_scaffold_395_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(8630..8851)
DNA (222bp) protein (74aa)
Response regulator putative VirR n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RM55_9FIRM
Response regulator putative VirR {ECO:0000313|EMBL:CDC46404.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_063_000G1_scaffold_395_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(8979..9518)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42320.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
fumarate hydratase
L3_063_000G1_scaffold_395_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9538..10383)
DNA (846bp) protein (282aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42319.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_063_000G1_scaffold_395_14
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10405..11355)
DNA (951bp) protein (317aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9L6Q2_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG80517.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L3_063_000G1_scaffold_395_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(11443..12696)
DNA (1254bp) protein (418aa)
methylaspartate ammonia-lyase (EC:4.3.1.2)
Methylaspartate ammonia-lyase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2W7_9FIRM
Methylaspartate ammonia-lyase {ECO:0000313|EMBL:CDC42315.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_063_000G1_scaffold_395_16
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12784..14232)
DNA (1449bp) protein (483aa)
Glutamate mutase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_01923}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01923};; Glutamate mutase E chain {ECO:0000256|HAMAP-Rule:MF_01923}; Glutamate mutase large subunit {ECO:0000256|HAMAP-Rule:MF_01923}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_01923}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
methylaspartate mutase subunit E (EC:5.4.99.1)
Methylaspartate mutase, E subunit n=3 Tax=Lachnospiraceae RepID=C9L6Q0_BLAHA
L3_063_000G1_scaffold_395_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(14216..15604)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RH20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42311.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
mutL; protein MutL
L3_063_000G1_scaffold_395_18
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(15626..16057)
DNA (432bp) protein (144aa)
Glutamate mutase sigma subunit {ECO:0000256|HAMAP-Rule:MF_00526}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_00526};; Glutamate mutase S chain {ECO:0000256|HAMAP-Rule:MF_00526}; Glutamate mutase small subunit {ECO:0000256|HAMAP-Rule:MF_00526}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_00526}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
mamA; methylaspartate mutase, S subunit (EC:5.4.99.1)
Methylaspartate mutase S chain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAH5_9FIRM
L3_063_000G1_scaffold_395_19
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16088..17491)
DNA (1404bp) protein (468aa)
Citrate lyase, alpha subunit {ECO:0000313|EMBL:EEX22091.1}; EC=2.8.3.10 {ECO:0000313|EMBL:EEX22091.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
citF; citrate lyase alpha chain (EC:4.1.3.6 2.8.3.10)
Citrate lyase, alpha subunit n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L6P7_BLAHA
L3_063_000G1_scaffold_395_20
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17488..18363)
DNA (876bp) protein (292aa)
citE; citrate lyase subunit beta (EC:4.1.3.6 4.1.3.34)
Citrate lyase beta subunit n=2 Tax=Lachnospiraceae RepID=R6NK22_9FIRM
Citrate lyase beta subunit {ECO:0000313|EMBL:CDC08714.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_063_000G1_scaffold_395_21
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18360..18632)
DNA (273bp) protein (91aa)
Citrate lyase acyl carrier protein {ECO:0000313|EMBL:EEX22089.1}; EC=4.1.3.6 {ECO:0000313|EMBL:EEX22089.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
citrate lyase subunit gamma n=1 Tax=Blautia producta RepID=UPI000368E41B
hypothetical protein
L3_063_000G1_scaffold_395_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(18668..19300)
DNA (633bp) protein (211aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42302.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_063_000G1_scaffold_395_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(19328..20221)
DNA (894bp) protein (298aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RH09_9FIRM
Glutamate formiminotransferase {ECO:0000313|EMBL:CDC42301.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_063_000G1_scaffold_395_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(20235..21491)
DNA (1257bp) protein (419aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2V3_9FIRM
L3_063_000G1_scaffold_395_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(21525..23570)
DNA (2046bp) protein (682aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RAG8_9FIRM
L3_063_000G1_scaffold_395_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23804..25147)
DNA (1344bp) protein (448aa)
yidJ; sulfatase YidJ (EC:3.1.6.-)
Putative arylsulfatase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TJY6_9CLOT
Putative arylsulfatase {ECO:0000313|EMBL:CCZ59311.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_063_000G1_scaffold_395_27
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25160..26023)
DNA (864bp) protein (288aa)
sn-glycerol-3-phosphate-binding protein n=2 Tax=Clostridium RepID=R5T831_9CLOT
sn-glycerol-3-phosphate-binding protein {ECO:0000313|EMBL:CCZ59309.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport system inner membrane protein
L3_063_000G1_scaffold_395_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26034..26930)
DNA (897bp) protein (299aa)
ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ATA8_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFC94948.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
binding-protein-dependent transport system inner membrane protein
L3_063_000G1_scaffold_395_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26942..28246)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W007_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96134.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
extracellular solute-binding protein
L3_063_000G1_scaffold_395_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28499..30007)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XJL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96133.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
Displaying items 1-30 of 75 in total

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