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L3_063_000G1_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_406_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

424..924
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3QPR2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS20528.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L3_063_000G1_scaffold_406_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1007..1765
DNA (759bp) protein (253aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3QPR1_9BACE
Putative lipoprotein {ECO:0000313|EMBL:EFF51594.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_406_3
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1798..2343
DNA (546bp) protein (182aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C3QPR0_9BACE
Putative membrane protein {ECO:0000313|EMBL:EFI40742.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Protein of unknown function (DUF1282).
L3_063_000G1_scaffold_406_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2353..2805
DNA (453bp) protein (151aa)
SsrA-binding protein n=8 Tax=Bacteroides RepID=C3QBI7_9BACE
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
SsrA-binding protein
L3_063_000G1_scaffold_406_5
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2895..5642
DNA (2748bp) protein (916aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
5-methyltetrahydrofolate--homocysteine methyltransferase n=3 Tax=Bacteroides RepID=C3QPQ8_9BACE
Methionine synthase {ECO:0000313|EMBL:CDB60024.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_000G1_scaffold_406_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5654..6253
DNA (600bp) protein (200aa)
Nitroreductase family protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WIN1_BACOV
Nitroreductase family protein {ECO:0000313|EMBL:EFF51598.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Nitroreductase
L3_063_000G1_scaffold_406_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6325..6450
DNA (126bp) protein (42aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A5ZH17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21386.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_000G1_scaffold_406_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6447..7994
DNA (1548bp) protein (516aa)
Transporter, SSS family n=8 Tax=Bacteroides RepID=A7LTW1_BACOV
Solute:sodium symporter (SSS) family transporter {ECO:0000313|EMBL:EIY65266.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Na+/proline symporter
L3_063_000G1_scaffold_406_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8031..9422)
DNA (1392bp) protein (464aa)
Transglycosylase SLT domain protein n=7 Tax=Bacteroides RepID=C3QPQ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN01796.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
L3_063_000G1_scaffold_406_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9447..10100)
DNA (654bp) protein (218aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
uridine kinase (EC:2.7.1.48)
Uridine kinase n=8 Tax=Bacteroides RepID=A7LTV9_BACOV
L3_063_000G1_scaffold_406_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10167..10466
DNA (300bp) protein (100aa)
Stress responsive A/B barrel domain protein n=5 Tax=Bacteroides RepID=A7LTV8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64919.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Stress responsive A/B Barrel Domain.
L3_063_000G1_scaffold_406_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10482..12539
DNA (2058bp) protein (686aa)
Cytochrome C biogenesis protein transmembrane region n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WIN7_BACOV
Cytochrome C biogenesis protein transmembrane region {ECO:0000313|EMBL:EFF51604.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Thiol:disulfide interchange protein
L3_063_000G1_scaffold_406_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12645..13349)
DNA (705bp) protein (235aa)
Pirin family protein n=6 Tax=Bacteroides RepID=A7LTV6_BACOV
Pirin {ECO:0000313|EMBL:EFF51605.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_406_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13545..14147
DNA (603bp) protein (201aa)
RNA polymerase sigma-70 factor n=5 Tax=Bacteroides RepID=C3QPP8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN01801.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_063_000G1_scaffold_406_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14234..15223
DNA (990bp) protein (330aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides RepID=D4WIP0_BACOV
FecR family protein {ECO:0000313|EMBL:KDS20542.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
Fe2+-dicitrate sensor, membrane component
L3_063_000G1_scaffold_406_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15251..15385)
DNA (135bp) protein (45aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7LTV3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY65258.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_063_000G1_scaffold_406_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15432..17756
DNA (2325bp) protein (775aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JQG9_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS20544.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
Outer membrane receptor proteins, mostly Fe transport
L3_063_000G1_scaffold_406_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17756..18877
DNA (1122bp) protein (374aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WIP1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN01804.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Outer membrane receptor proteins, mostly Fe transport
L3_063_000G1_scaffold_406_19
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18901..20292
DNA (1392bp) protein (464aa)
SusD family protein n=6 Tax=Bacteroides RepID=C3QPP4_9BACE
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:EFI40730.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
RagB/SusD domain-containing protein
L3_063_000G1_scaffold_406_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20320..22284
DNA (1965bp) protein (655aa)
PQQ enzyme repeat protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WIP3_BACOV
PQQ enzyme repeat protein {ECO:0000313|EMBL:EFF51610.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
FOG: WD40-like repeat
L3_063_000G1_scaffold_406_21
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22291..23172
DNA (882bp) protein (294aa)
AP endonuclease, family 2 n=3 Tax=Bacteroides RepID=C3QPP1_9BACE
AP endonuclease family 2 {ECO:0000313|EMBL:CDB60039.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Sugar phosphate isomerases/epimerases
L3_063_000G1_scaffold_406_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23174..24232
DNA (1059bp) protein (353aa)
Putative lipoprotein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WIP5_BACOV
Beta-lactamase superfamily domain protein {ECO:0000313|EMBL:KDS20548.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L3_063_000G1_scaffold_406_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24253..25152
DNA (900bp) protein (300aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase family protein n=5 Tax=Bacteroides RepID=D4WIP6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN01809.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_063_000G1_scaffold_406_24
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25165..26532
DNA (1368bp) protein (456aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides RepID=C3QPN8_9BACE
Transporter major facilitator family protein {ECO:0000313|EMBL:CDB60042.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Sugar phosphate permease
L3_063_000G1_scaffold_406_25
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26451..26654)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JBH0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB60043.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_063_000G1_scaffold_406_26
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26739..27395
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6JN15_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB60044.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Protein of unknown function (DUF2490).
L3_063_000G1_scaffold_406_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27699..29606
DNA (1908bp) protein (636aa)
Conserved domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WIP9_BACOV
Conserved domain protein {ECO:0000313|EMBL:EFF51616.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_406_28
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29680..30171
DNA (492bp) protein (164aa)
Uncharacterized protein, possibly involved in aromatic compounds catabolism n=10 Tax=Bacteroides RepID=D6D3V8_9BACE
Uncharacterized protein, possibly involved in aromatic compounds catabolism
Thioesterase family protein {ECO:0000313|EMBL:EEZ03418.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_063_000G1_scaffold_406_29
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30417..31268
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=9 Tax=Bacteroides RepID=C3QBL0_9BACE
L3_063_000G1_scaffold_406_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31298..32587
DNA (1290bp) protein (430aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WIQ2_BACOV
Displaying items 1-30 of 67 in total

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