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L3_063_000G1_scaffold_410

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_410_1
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

190..1275
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30828.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
transcriptional regulator, CdaR family
L3_063_000G1_scaffold_410_2
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1289..3568
DNA (2280bp) protein (760aa)
Aconitase A (EC:4.2.1.3)
Aconitase domain protein n=2 Tax=Clostridiales RepID=B0NGH3_CLOSV
Aconitase domain protein {ECO:0000313|EMBL:EDS06327.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_063_000G1_scaffold_410_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3725..4201
DNA (477bp) protein (159aa)
Sigma-70 region 2 n=3 Tax=Clostridiales RepID=B0NGH4_CLOSV
Sigma-70 region 2 {ECO:0000313|EMBL:EDS06328.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
RNA polymerase sigma factor, sigma-70 family
L3_063_000G1_scaffold_410_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4220..6160
DNA (1941bp) protein (647aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NGH5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30824.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_410_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6179..6433)
DNA (255bp) protein (85aa)
BioY family protein n=2 Tax=Clostridiales RepID=B0NGH6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30823.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_410_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6543..6833
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63703.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_063_000G1_scaffold_410_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7927..9681
DNA (1755bp) protein (585aa)
Diguanylate cyclase (GGDEF) domain protein n=2 Tax=Clostridiales RepID=B0NGH7_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30822.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
signaling protein
L3_063_000G1_scaffold_410_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9817..12699
DNA (2883bp) protein (961aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30821.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_410_9
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12811..14721
DNA (1911bp) protein (637aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=2 Tax=Clostridiales RepID=B0NGH9_CLOSV
L3_063_000G1_scaffold_410_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14814..16037)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBW5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08051.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_063_000G1_scaffold_410_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16189..16512)
DNA (324bp) protein (108aa)
Thioredoxin n=2 Tax=Clostridiales RepID=B0NBW4_CLOSV
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
thioredoxin
L3_063_000G1_scaffold_410_12
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16726..17394)
DNA (669bp) protein (223aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBW2_CLOSV
L3_063_000G1_scaffold_410_13
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17598..17909
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBW1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08047.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_063_000G1_scaffold_410_14
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17913..18959
DNA (1047bp) protein (349aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
ATP synthase, subunit C n=2 Tax=Clostridiales RepID=B0NBW0_CLOSV
ATP synthase subunit {ECO:0000313|EMBL:EGN30815.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_000G1_scaffold_410_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18956..20896
DNA (1941bp) protein (647aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
V-type ATPase 116kDa subunit family protein n=2 Tax=Clostridiales RepID=B0NBV9_CLOSV
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_063_000G1_scaffold_410_16
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20925..21356
DNA (432bp) protein (144aa)
ATP synthase subunit C. (EC:3.6.3.14)
ATP synthase subunit C n=2 Tax=Clostridiales RepID=B0NBV8_CLOSV
ATP synthase subunit C {ECO:0000313|EMBL:EDS08044.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_063_000G1_scaffold_410_17
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21358..21666
DNA (309bp) protein (103aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
ATP synthase, subunit F n=2 Tax=Clostridiales RepID=B0NBV7_CLOSV
ATP synthase subunit {ECO:0000313|EMBL:EGN30812.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_063_000G1_scaffold_410_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21711..22298
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30811.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Archaeal/vacuolar-type H+-ATPase subunit E
L3_063_000G1_scaffold_410_19
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22291..24063
DNA (1773bp) protein (591aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=2 Tax=Clostridiales RepID=B0NBV5_CLOSV
L3_063_000G1_scaffold_410_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24078..25466
DNA (1389bp) protein (463aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=2 Tax=Clostridiales RepID=B0NBV4_CLOSV
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_063_000G1_scaffold_410_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25504..26121
DNA (618bp) protein (206aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=2 Tax=Clostridiales RepID=B0NBV3_CLOSV
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_063_000G1_scaffold_410_22
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26386..26544
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NBV2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08038.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_063_000G1_scaffold_410_23
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26680..27003)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NM04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09389.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
transposase
L3_063_000G1_scaffold_410_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27301..27672
DNA (372bp) protein (124aa)
Signal peptidase I n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPY3_9FIRM
Signal peptidase I {ECO:0000313|EMBL:EGN30795.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
sipW; type I signal peptidase SipW
L3_063_000G1_scaffold_410_25
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27832..28629)
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=2 Tax=Clostridiales RepID=B0NBT8_CLOSV
L3_063_000G1_scaffold_410_26
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28729..30000)
DNA (1272bp) protein (424aa)
abgB2; p-aminobenzoyl-glutamate hydrolase subunit B (EC:3.5.1.-)
Amidohydrolase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBT7_CLOSV
Amidohydrolase {ECO:0000313|EMBL:EDS08023.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_063_000G1_scaffold_410_27
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30020..30724)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30792.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L-2-amino-thiazoline-4-carboxylic acid hydrolase
L3_063_000G1_scaffold_410_28
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30828..31349)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NBT5_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30791.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_063_000G1_scaffold_410_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31983..33770
DNA (1788bp) protein (596aa)
Creatinase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBT3_CLOSV
Creatinase {ECO:0000313|EMBL:EDS08019.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
metallopeptidase, family M24
L3_063_000G1_scaffold_410_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33949..35247
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KPX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30789.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
ProP; major facilitator superfamily permease
Displaying items 1-30 of 65 in total

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