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L3_063_000G1_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_463_1
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

839..1648
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDT6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA89553.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_000G1_scaffold_463_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1879..2775)
DNA (897bp) protein (299aa)
Aldose 1-epimerase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBB1_9ACTN
Aldose 1-epimerase {ECO:0000313|EMBL:EEP43956.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
aldose-1-epimerase
L3_063_000G1_scaffold_463_3
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3183..3659
DNA (477bp) protein (159aa)
Transcriptional regulator, MarR family n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDT2_9ACTN
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEA89549.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
MarR family transcripitonal regulator
L3_063_000G1_scaffold_463_4
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3652..5415
DNA (1764bp) protein (588aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDT1_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA89548.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
ABC transporter
L3_063_000G1_scaffold_463_5
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5408..7327
DNA (1920bp) protein (640aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDT0_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA89547.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
ABC transporter
L3_063_000G1_scaffold_463_6
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7419..7871)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDS9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA89546.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_063_000G1_scaffold_463_7
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7969..8160)
DNA (192bp) protein (64aa)
Putative heme exporter protein CcmD n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDS7_9ACTN
Putative heme exporter protein CcmD {ECO:0000313|EMBL:EEA89544.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_000G1_scaffold_463_8
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8161..9042)
DNA (882bp) protein (294aa)
Cytochrome c assembly protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDS6_9ACTN
Cytochrome c assembly protein {ECO:0000313|EMBL:EEA89543.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
cytochrome c biogenesis ABC transporter permease
L3_063_000G1_scaffold_463_9
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9088..9924)
DNA (837bp) protein (279aa)
Putative heme exporter protein CcmB n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDS5_9ACTN
Putative heme exporter protein CcmB {ECO:0000313|EMBL:EEA89542.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_000G1_scaffold_463_10
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9925..10704)
DNA (780bp) protein (260aa)
ABC transporter, ATP-binding protein (Fragment) n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDS4_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA89541.1}; Flags: Fragment;; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
multidrug ABC transporter ATPase
L3_063_000G1_scaffold_463_11
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10701..12899)
DNA (2199bp) protein (733aa)
Putative cytochrome c-type biogenesis protein CcmF (Fragment) n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDS3_9ACTN
Putative cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:EEA89598.1}; Flags: Fragment;; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
CcmF; cytochrome c biogenesis factor
L3_063_000G1_scaffold_463_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12981..13664)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBA1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43946.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_000G1_scaffold_463_13
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13819..14583
DNA (765bp) protein (255aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDS0_9ACTN
L3_063_000G1_scaffold_463_14
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14631..16361)
DNA (1731bp) protein (577aa)
Dihydropteroate synthase {ECO:0000313|EMBL:EEA89594.1}; EC=2.5.1.15 {ECO:0000313|EMBL:EEA89594.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Dihydropteroate synthase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDR9_9ACTN
dihydropteroate synthase
L3_063_000G1_scaffold_463_15
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16535..17371
DNA (837bp) protein (279aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EEP43942.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EEP43942.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
exodeoxyribonuclease III Xth (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FB97_9ACTN
L3_063_000G1_scaffold_463_16
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17349..18386)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00034ABE9C
Uncharacterized protein {ECO:0000313|EMBL:EGX70923.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
sodium/hydrogen exchanger
L3_063_000G1_scaffold_463_17
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18452..19219)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FB96_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43941.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_000G1_scaffold_463_18
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19219..20802)
DNA (1584bp) protein (528aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDR3_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA89588.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
CbiO; cobalt ABC transporter ATPase
L3_063_000G1_scaffold_463_19
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20799..21788)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDR2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA89587.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_063_000G1_scaffold_463_20
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21956..23356
DNA (1401bp) protein (467aa)
glucosamine-1-phosphate N-acetyltransferase (EC:2.7.7.23 2.3.1.157)
Bifunctional protein GlmU n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FB92_9ACTN
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_063_000G1_scaffold_463_21
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23621..24607
DNA (987bp) protein (329aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FB93_9ACTN
L3_063_000G1_scaffold_463_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25307..26257
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00035E5E6F
Uncharacterized protein {ECO:0000313|EMBL:KGI75074.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_063_000G1_scaffold_463_23
unknown

Not on your lists

comp(26456..27115)
DNA (660bp) protein (220aa)

This feature has no annotations

L3_063_000G1_scaffold_463_24
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27124..27852)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YK37_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83977.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
L3_063_000G1_scaffold_463_25
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27852..33740)
DNA (5889bp) protein (1963aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HPU3_9ACTN
Putative uncharacterized protein {ECO:0000313|EMBL:EGC88721.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
L3_063_000G1_scaffold_463_26
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33737..34435)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YWU9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83979.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
L3_063_000G1_scaffold_463_27
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34466..35239)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GC55_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90145.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
L3_063_000G1_scaffold_463_28
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35300..35854)
DNA (555bp) protein (185aa)
Signal peptidase I {ECO:0000313|EMBL:EGC88800.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EGC88800.1};; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
Signal peptidase I n=1 Tax=Eggerthella sp. HGA1 RepID=F0HPU6_9ACTN
signal peptidase I
L3_063_000G1_scaffold_463_29
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36177..36806
DNA (630bp) protein (210aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FB91_9ACTN
L3_063_000G1_scaffold_463_30
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37095..37931
DNA (837bp) protein (279aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.8.1.-)
Oxidoreductase NAD-binding domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDQ4_9ACTN
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:EEA89579.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Displaying items 1-30 of 53 in total

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