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L3_063_000G1_scaffold_512

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_512_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX74449.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_063_000G1_scaffold_512_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(438..635)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77414.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Small, acid-soluble spore proteins, alpha/beta type.
L3_063_000G1_scaffold_512_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(776..961)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76287.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Putative stress-responsive transcriptional regulator
L3_063_000G1_scaffold_512_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1093..2046)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77416.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF2807).
L3_063_000G1_scaffold_512_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2043..2750)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77417.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1700).
L3_063_000G1_scaffold_512_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2747..3067)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76290.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, PadR family
L3_063_000G1_scaffold_512_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3730..5133
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76291.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
NOL1/NOP2/sun family putative RNA methylase
L3_063_000G1_scaffold_512_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5189..8998)
DNA (3810bp) protein (1270aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
recombination helicase AddA, Firmicutes type (EC:3.1.11.5)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHH6_9FIRM
L3_063_000G1_scaffold_512_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9000..12338)
DNA (3339bp) protein (1113aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77422.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATP-dependent nuclease subunit B
L3_063_000G1_scaffold_512_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12442..12879
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76294.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_063_000G1_scaffold_512_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12941..14857)
DNA (1917bp) protein (639aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU8_9FIRM
NAD+ synthetase {ECO:0000313|EMBL:EES76295.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_063_000G1_scaffold_512_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14916..15794)
DNA (879bp) protein (293aa)
33 kDa chaperonin n=2 Tax=Ruminococcus RepID=C6JEU9_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Disulfide bond chaperones of the HSP33 family
L3_063_000G1_scaffold_512_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15912..16724)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77440.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_063_000G1_scaffold_512_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16896..18041)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77442.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_063_000G1_scaffold_512_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18444..20588)
DNA (2145bp) protein (715aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV3_9FIRM
L3_063_000G1_scaffold_512_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20931..22769)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76301.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type multidrug transport system, ATPase and permease components
L3_063_000G1_scaffold_512_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22766..24928)
DNA (2163bp) protein (721aa)
multidrug family ABC transporter ATP-binding/permease (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76302.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_063_000G1_scaffold_512_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25068..25535)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76303.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, MarR family
L3_063_000G1_scaffold_512_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25769..26653)
DNA (885bp) protein (295aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKW0_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD78661.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
L3_063_000G1_scaffold_512_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26827..28161
DNA (1335bp) protein (445aa)
Transporter n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEV8_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sodium:neurotransmitter symporter
L3_063_000G1_scaffold_512_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28363..29364)
DNA (1002bp) protein (334aa)
cytidylate kinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D70BBE
Uncharacterized protein {ECO:0000313|EMBL:EES76306.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_063_000G1_scaffold_512_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29380..30945)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76484.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transporter, UIT6 family (TC 9.B.53)
L3_063_000G1_scaffold_512_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31246..31419)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEW1_9FIRM
Heat-shock protein 101 {ECO:0000313|EMBL:CDD76483.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_063_000G1_scaffold_512_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31420..34011)
DNA (2592bp) protein (864aa)
ATP-dependent chaperone ClpB n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW2_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATP-dependent chaperone ClpB
L3_063_000G1_scaffold_512_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34110..34406)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76310.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
alpha/beta fold family hydrolase
L3_063_000G1_scaffold_512_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34475..34717)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76311.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
membrane protein
L3_063_000G1_scaffold_512_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34714..35184)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76312.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sortase
L3_063_000G1_scaffold_512_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35181..35417)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76313.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
AcrR; transcriptional regulator
L3_063_000G1_scaffold_512_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35599..35793)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76314.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_063_000G1_scaffold_512_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35790..36623)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76315.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
alpha/beta fold family hydrolase
Displaying items 1-30 of 59 in total

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