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L3_063_000G1_scaffold_517

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_517_1
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..738
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000362CC7A
YD repeat-containing protein
YD repeat-containing protein {ECO:0000313|EMBL:ADL50335.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_063_000G1_scaffold_517_2
unknown

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943..1518
DNA (576bp) protein (192aa)

This feature has no annotations

L3_063_000G1_scaffold_517_3
unknown

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1810..2562
DNA (753bp) protein (251aa)

This feature has no annotations

L3_063_000G1_scaffold_517_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2571..2825)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10361.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_063_000G1_scaffold_517_5
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2839..4116)
DNA (1278bp) protein (426aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
DNA polymerase IV n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AWD6_SYNWW
L3_063_000G1_scaffold_517_6
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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4480..5379
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EKB6_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX92893.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Transcriptional regulator
L3_063_000G1_scaffold_517_7
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5413..6504
DNA (1092bp) protein (364aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9N8Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79421.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_063_000G1_scaffold_517_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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6569..7723
DNA (1155bp) protein (385aa)
Uncharacterized oxidoreductases Fe-dependent alcohol dehydrogenase family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D346_9FIRM
Uncharacterized oxidoreductases Fe-dependent alcohol dehydrogenase family {ECO:0000313|EMBL:CCX74655.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L3_063_000G1_scaffold_517_9
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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7742..8371
DNA (630bp) protein (210aa)
Flavodoxin n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EZ83_9FIRM
Flavodoxin {ECO:0000313|EMBL:CCX93361.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_063_000G1_scaffold_517_10
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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8500..9486
DNA (987bp) protein (329aa)
Esterase/lipase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EXR4_9FIRM
Esterase/lipase {ECO:0000313|EMBL:CCX93362.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Esterase/lipase
L3_063_000G1_scaffold_517_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9706..10158
DNA (453bp) protein (151aa)
Flavin reductase {ECO:0000313|EMBL:EDY33192.1}; EC=1.7.-.- {ECO:0000313|EMBL:EDY33192.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Flavin reductase n=2 Tax=Ruminococcus lactaris RepID=B5CNB1_9FIRM
hypothetical protein
L3_063_000G1_scaffold_517_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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10173..11018
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D337_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74645.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Aldo/keto reductases, related to diketogulonate reductase
L3_063_000G1_scaffold_517_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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11088..11915
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D743_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74644.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Predicted peptidase
L3_063_000G1_scaffold_517_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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11917..12615
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74643.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_063_000G1_scaffold_517_15
unknown

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12612..12749
DNA (138bp) protein (46aa)

This feature has no annotations

L3_063_000G1_scaffold_517_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12821..14098)
DNA (1278bp) protein (426aa)
Galactokinase (EC:2.7.1.6)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AQ32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45164.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_063_000G1_scaffold_517_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14095..15108)
DNA (1014bp) protein (338aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5QWP8_9FIRM
L3_063_000G1_scaffold_517_18
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(15112..16605)
DNA (1494bp) protein (498aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
galT; putative galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=3 Tax=Coprobacillus RepID=C3RN63_9FIRM
L3_063_000G1_scaffold_517_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16795..17793
DNA (999bp) protein (333aa)
Transcriptional regulator, LacI family n=5 Tax=Erysipelotrichaceae RepID=B0N0T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45168.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
transcriptional regulator, LacI family
L3_063_000G1_scaffold_517_20
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17939..18973
DNA (1035bp) protein (345aa)
Threonine aldolase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BFI4_9CLOT
Threonine aldolase {ECO:0000313|EMBL:CDA79239.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
threonine aldolase
L3_063_000G1_scaffold_517_21
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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19196..19408
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KZB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS51869.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
Fe2+ transport system protein A
L3_063_000G1_scaffold_517_22
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19441..19662
DNA (222bp) protein (74aa)
Fe2+ transport system protein A n=1 Tax=Clostridium sp. CAG:138 RepID=R6AM51_9CLOT
Fe2+ transport system protein A {ECO:0000313|EMBL:CDA52005.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
Fe2+ transport system protein A
L3_063_000G1_scaffold_517_23
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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19738..22161
DNA (2424bp) protein (808aa)
Ferrous iron transport protein B n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T951_9CLOT
ferrous iron transporter FeoB
Tax=BJP_IG2069_Clostridiales_48_15
L3_063_000G1_scaffold_517_24
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22453..22848
DNA (396bp) protein (132aa)
Iron dependent repressor n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MRC4_9FIRM
Iron dependent repressor {ECO:0000313|EMBL:CCY92269.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
iron-dependent transcription repressor
L3_063_000G1_scaffold_517_25
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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23070..25064
DNA (1995bp) protein (665aa)
Serine phosphatase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CUC9_THEYO
Serine phosphatase {ECO:0000313|EMBL:ERM93339.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
RsbU; Serine phosphatase RsbU, regulator of sigma subunit
L3_063_000G1_scaffold_517_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25134..25646
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family n=16 Tax=Clostridium difficile RepID=G6BA48_CLODI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHJ28424.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
gcn5-related n-acetyltransferase
L3_063_000G1_scaffold_517_27
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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25630..27003
DNA (1374bp) protein (458aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Stomatobaculum longum RepID=H1HTY7_9FIRM
tRNA(Ile)-lysidine synthetase
L3_063_000G1_scaffold_517_28
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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26997..27536
DNA (540bp) protein (180aa)
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:EOD01136.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EOD01136.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CR38_9CLOT
L3_063_000G1_scaffold_517_29
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

27616..29580
DNA (1965bp) protein (655aa)
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A003_MAHA5
L3_063_000G1_scaffold_517_30
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29709..30707
DNA (999bp) protein (333aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AGZ9_9CLOT
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CCX41119.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Displaying items 1-30 of 63 in total

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