ggKbase home page

L3_063_000G1_scaffold_692

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_692_1
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(70..1125)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3QHG4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK68108.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_063_000G1_scaffold_692_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1209..1613)
DNA (405bp) protein (135aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A7M3E1_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY69353.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_063_000G1_scaffold_692_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1694..2755
DNA (1062bp) protein (354aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.- {ECO:0000256|SAAS:SAAS00272647};; EC=4.2.3.4 {ECO:0000256|SAAS:SAAS00210855};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
3-dehydroquinate synthase n=10 Tax=Bacteroides RepID=D6D104_9BACE
L3_063_000G1_scaffold_692_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2868..3737)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=6 Tax=Bacteroides RepID=A7M3D9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN02363.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_063_000G1_scaffold_692_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4418..5269)
DNA (852bp) protein (284aa)
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJE3_BACOV
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) {ECO:0000313|EMBL:EFF51316.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_692_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5278..5487)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJE4_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51317.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_000G1_scaffold_692_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5505..5708)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJE5_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51318.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_000G1_scaffold_692_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5726..5929)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJE6_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51319.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_000G1_scaffold_692_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5947..6183)
DNA (237bp) protein (79aa)
Conserved domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJE7_BACOV
Conserved domain protein {ECO:0000313|EMBL:EFF51320.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_063_000G1_scaffold_692_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6365..6964
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJE8_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51321.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_692_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6961..7755
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJE9_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51322.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_692_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8315..8662)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QZK2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS11711.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_063_000G1_scaffold_692_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9213..9785)
DNA (573bp) protein (191aa)
Sel1 repeat protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJF0_BACOV
Sel1 repeat protein {ECO:0000313|EMBL:EFF51323.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_692_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9998..11005)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJF1_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51324.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_063_000G1_scaffold_692_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11057..11824)
DNA (768bp) protein (256aa)
DNA binding domain, excisionase family n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJF2_BACOV
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFF51325.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
DNA-binding protein
L3_063_000G1_scaffold_692_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11853..13100)
DNA (1248bp) protein (416aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJF3_BACOV
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFF51326.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
recombinase
L3_063_000G1_scaffold_692_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13689..14909
DNA (1221bp) protein (407aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) (EC:5.-.-.-)
Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJF4_BACOV
L3_063_000G1_scaffold_692_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14954..15472
DNA (519bp) protein (173aa)
Hydrolase, NUDIX family n=2 Tax=Bacteroides ovatus RepID=A7M3C9_BACOV
Isopentenyldiphosphate isomerase
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDO08762.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_063_000G1_scaffold_692_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15450..15992)
DNA (543bp) protein (181aa)
Glutathione peroxidase (EC:1.11.1.9)
Glutathione peroxidase n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M3C8_BACOV
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_063_000G1_scaffold_692_20
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16203..17564
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M385_9BACE
heavy metal efflux pump (cobalt-zinc-cadmium)
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EIY88521.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_063_000G1_scaffold_692_21
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17630..20527
DNA (2898bp) protein (966aa)
Heavy metal efflux pump CzcA family n=2 Tax=Bacteroides RepID=R6JCC9_9BACE
Heavy metal efflux pump CzcA family {ECO:0000313|EMBL:CDB58895.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
heavy metal efflux pump (cobalt-zinc-cadmium)
L3_063_000G1_scaffold_692_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20590..21483
DNA (894bp) protein (298aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7M3C6_BACOV
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY55176.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
cation efflux system protein
L3_063_000G1_scaffold_692_23
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21554..22621
DNA (1068bp) protein (356aa)
Histidine kinase n=2 Tax=Bacteroides RepID=D4WJG0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY88519.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Putative regulator of cell autolysis
L3_063_000G1_scaffold_692_24
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22627..23421
DNA (795bp) protein (265aa)
Response regulator of the LytR/AlgR family n=10 Tax=Bacteroides RepID=D6D0Z0_9BACE
Response regulator of the LytR/AlgR family
Two-component system response regulator {ECO:0000313|EMBL:CDM07563.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
L3_063_000G1_scaffold_692_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23718..25664)
DNA (1947bp) protein (649aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJG2_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51335.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
alpha-glucosidase
L3_063_000G1_scaffold_692_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25768..28125)
DNA (2358bp) protein (786aa)
Putative alpha-1,2-mannosidase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJG3_BACOV
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EFF51336.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
alpha-1,2-mannosidase, putative
L3_063_000G1_scaffold_692_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28136..28930)
DNA (795bp) protein (265aa)
Plant Basic Secretory Protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJG4_BACOV
Plant Basic Secretory Protein {ECO:0000313|EMBL:EFF51337.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Plant Basic Secretory Protein.
L3_063_000G1_scaffold_692_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28944..31286)
DNA (2343bp) protein (781aa)
Putative alpha-1,2-mannosidase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJG5_BACOV
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EFF51338.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
alpha-1,2-mannosidase, putative
L3_063_000G1_scaffold_692_29
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31293..33578)
DNA (2286bp) protein (762aa)
Putative alpha-1,2-mannosidase n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QZI5_9BACE
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EEO51382.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
alpha-1,2-mannosidase, putative
L3_063_000G1_scaffold_692_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33886..35511)
DNA (1626bp) protein (542aa)
SusD family protein n=6 Tax=Bacteroides RepID=C3QHE7_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51340.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
SusD family.
Displaying items 1-30 of 86 in total

View Taxonomy