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L3_063_000G1_scaffold_695

Search features with annotation key words

Displaying items 1-30 of 232 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_695_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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149..1144
DNA (996bp) protein (332aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
tRNA-dihydrouridine synthase n=2 Tax=Bacteroides RepID=I9PPA1_9BACE
tRNA-U20-dihydrouridine synthase
L3_063_000G1_scaffold_695_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1200..2165)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8UVZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18345.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
PAP2 superfamily.
L3_063_000G1_scaffold_695_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2156..3163)
DNA (1008bp) protein (336aa)
NAD dependent epimerase/dehydratase family protein n=3 Tax=Bacteroides RepID=A5ZEJ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73854.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
NAD-dependent epimerase/dehydratase
L3_063_000G1_scaffold_695_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3513..5669
DNA (2157bp) protein (719aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=3 Tax=Bacteroides RepID=A5ZEJ5_9BACE
L3_063_000G1_scaffold_695_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5701..6180
DNA (480bp) protein (160aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEJ6_9BACE
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EDM21362.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted flavin-nucleotide-binding protein
L3_063_000G1_scaffold_695_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6183..8543
DNA (2361bp) protein (787aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 C-terminal domain protein n=2 Tax=Bacteroides caccae RepID=A5ZEJ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18340.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_063_000G1_scaffold_695_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8674..10440)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EEE2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18339.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_000G1_scaffold_695_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10532..11479)
DNA (948bp) protein (316aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Cysteine synthase A n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEJ9_9BACE
cysteine synthase A
L3_063_000G1_scaffold_695_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11583..11921)
DNA (339bp) protein (113aa)
Cupin domain protein n=3 Tax=Bacteroides RepID=A5ZEK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18337.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
pectin degradation protein
L3_063_000G1_scaffold_695_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12144..13565
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PP93_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18336.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Dienelactone hydrolase and related enzymes
L3_063_000G1_scaffold_695_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13830..14972
DNA (1143bp) protein (381aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides RepID=A5ZEK2_9BACE
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM21368.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Arabinose efflux permease
L3_063_000G1_scaffold_695_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15247..15348
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZEK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21369.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_063_000G1_scaffold_695_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15405..18845
DNA (3441bp) protein (1147aa)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EDM21370.1}; EC=1.2.1.- {ECO:0000313|EMBL:EDM21370.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEK4_9BACE
proline dehydrogenase
L3_063_000G1_scaffold_695_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19082..20185
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=3 Tax=Bacteroides RepID=A5ZEK5_9BACE
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ychF; GTP-dependent nucleic acid-binding protein EngD
L3_063_000G1_scaffold_695_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20228..21139
DNA (912bp) protein (304aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
2-dehydropantoate 2-reductase n=3 Tax=Bacteroides RepID=A5ZEK6_9BACE
oxidoreductase
L3_063_000G1_scaffold_695_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21168..22010
DNA (843bp) protein (281aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Prolipoprotein diacylglyceryl transferase n=3 Tax=Bacteroides RepID=A5ZEK7_9BACE
prolipoprotein diacylglyceryl transferase
L3_063_000G1_scaffold_695_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22151..24769)
DNA (2619bp) protein (873aa)
DNA mismatch repair protein MutS n=1 Tax=Bacteroides caccae CAG:21 RepID=R5URX9_9BACE
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
DNA mismatch repair protein MutS
L3_063_000G1_scaffold_695_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25092..27191)
DNA (2100bp) protein (700aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=2 Tax=Bacteria RepID=A5ZEK9_9BACE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDM21375.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
beta-galactosidase
L3_063_000G1_scaffold_695_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27222..28340)
DNA (1119bp) protein (373aa)
Glycosyl hydrolase, family 88 n=3 Tax=Bacteroides RepID=A5ZEL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72406.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
L3_063_000G1_scaffold_695_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28569..30425)
DNA (1857bp) protein (619aa)
SusD family protein n=3 Tax=root RepID=A5ZEL1_9BACE
SusD family protein {ECO:0000313|EMBL:EDM21377.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RagB/SusD domain-containing protein
L3_063_000G1_scaffold_695_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30439..33801)
DNA (3363bp) protein (1121aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides caccae RepID=A5ZEL2_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY18324.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
TonB-dependent receptor plug
L3_063_000G1_scaffold_695_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34048..35118)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PPU8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18323.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
anti-FecI sigma factor, FecR
L3_063_000G1_scaffold_695_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35228..35803
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Bacteroides caccae RepID=I8UZB1_9BACE
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY18322.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_063_000G1_scaffold_695_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35834..36709)
DNA (876bp) protein (292aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9PP85_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72413.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_063_000G1_scaffold_695_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37253..39196
DNA (1944bp) protein (648aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEL7_9BACE
L3_063_000G1_scaffold_695_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39213..39881
DNA (669bp) protein (223aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEL7_9BACE
L3_063_000G1_scaffold_695_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39998..40915
DNA (918bp) protein (306aa)
Uncharacterized protein n=4 Tax=root RepID=A5ZEL8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72415.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_063_000G1_scaffold_695_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


40980..41561
DNA (582bp) protein (194aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEL9_9BACE
L3_063_000G1_scaffold_695_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41593..42429
DNA (837bp) protein (279aa)
OmpA family protein n=3 Tax=Bacteroides RepID=A5ZEM0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18317.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
flagellar motor protein MotB
L3_063_000G1_scaffold_695_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42572..43807)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZEM1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21387.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
Displaying items 1-30 of 232 in total

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