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L3_063_000G1_scaffold_796

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_796_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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268..834
DNA (567bp) protein (189aa)
Chromate transport protein n=31 Tax=Clostridium difficile RepID=D5Q9D6_CLODI
Chromate transport protein {ECO:0000313|EMBL:EHJ34693.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
chromate transporter
L3_063_000G1_scaffold_796_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(963..1199)
DNA (237bp) protein (79aa)
Alpha/beta hydrolase family protein n=4 Tax=Clostridium difficile RepID=T4S2G9_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK99001.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L3_063_000G1_scaffold_796_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1508..4936)
DNA (3429bp) protein (1143aa)
Excinuclease ABC subunit A n=2 Tax=Clostridium difficile RepID=T4Q0B0_CLODI
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative UvrABC system protein A 1 (UvrA protein1) (Excinuclease ABC subunit A 1)
L3_063_000G1_scaffold_796_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5255..7489
DNA (2235bp) protein (745aa)
Diguanylate cyclase domain protein n=21 Tax=Clostridium difficile RepID=T2UHN2_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQG78761.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative signaling protein
L3_063_000G1_scaffold_796_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7745..9775
DNA (2031bp) protein (677aa)
PRD domain protein n=1 Tax=Clostridium difficile P42 RepID=T4Q1K0_CLODI
PRD domain protein {ECO:0000313|EMBL:EQE70484.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
transcription antiterminator
L3_063_000G1_scaffold_796_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9772..10224
DNA (453bp) protein (151aa)
PTS system, fructose subfamily, IIA component domain protein n=193 Tax=Clostridium difficile RepID=T3IHQ9_CLODC
PTS system, fructose-like IIA component
PTS system, fructose-like IIA component {ECO:0000313|EMBL:CAJ67027.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_063_000G1_scaffold_796_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10226..11281
DNA (1056bp) protein (352aa)
PTS system, Fru family, IIC component domain protein n=10 Tax=Clostridium difficile RepID=T2V763_CLODI
putative PTS system fructose-like transporter subunit EIIC
PTS system, fructose-like IIC component {ECO:0000313|EMBL:CCL21885.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_063_000G1_scaffold_796_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11348..11656
DNA (309bp) protein (103aa)
PTS system, fructose-like IIB component {ECO:0000313|EMBL:CCL29575.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCL29575.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Fructose-like phosphotransferase enzyme IIB component 2 n=198 Tax=Clostridium difficile RepID=C9XIY1_CLODC
PTS system transporter subunit fructose-like transporter subunit EIIB
L3_063_000G1_scaffold_796_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11760..13025
DNA (1266bp) protein (422aa)
Tagatose 6 phosphate kinase family protein n=146 Tax=Clostridium difficile RepID=T2TQF3_CLODI
Tagatose 6 phosphate kinase family protein {ECO:0000313|EMBL:EQG78783.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
tagatose 6-phosphate kinase
L3_063_000G1_scaffold_796_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13113..13829
DNA (717bp) protein (239aa)
Putative hydrolase, HAD superfamily, subfamily IA {ECO:0000313|EMBL:CCL21888.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCL21888.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
HAD hydrolase, IA, variant 1 family protein n=2 Tax=Clostridium difficile RepID=T4Q1K6_CLODI
hydrolase
L3_063_000G1_scaffold_796_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14024..14317)
DNA (294bp) protein (98aa)
Coat F domain protein n=208 Tax=Clostridium difficile RepID=C9XIY4_CLODC
spore coat protein
Putative spore coat protein {ECO:0000313|EMBL:CCL29578.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_063_000G1_scaffold_796_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14323..14538)
DNA (216bp) protein (72aa)
Uncharacterized protein n=18 Tax=Clostridium difficile RepID=D5Q9E7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK95044.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
hypothetical protein
L3_063_000G1_scaffold_796_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14986..15384
DNA (399bp) protein (133aa)
Transposase IS200 like family protein n=165 Tax=Clostridium difficile RepID=T3IJ23_CLODC
transposase IS200/IS605-like OrfA
Transposase {ECO:0000313|EMBL:CDS83266.1}; Transposase IS200/IS605-like OrfA {ECO:0000313|EMBL:CDS83120.1}; Transposase-related protein {ECO:0000313|EMBL:CKH78348.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_063_000G1_scaffold_796_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15381..16544
DNA (1164bp) protein (388aa)
Transposase, IS605 OrfB family n=136 Tax=Clostridium difficile RepID=T3IHP0_CLODC
Transposase IS200/IS605-like OrfB
Transposase IS200/IS605-like OrfB {ECO:0000313|EMBL:CAJ67037.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_063_000G1_scaffold_796_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16799..17311)
DNA (513bp) protein (171aa)
Nitroreductase family protein n=126 Tax=Clostridium difficile RepID=T2UKI0_CLODI
Putative nitroreductase {ECO:0000313|EMBL:CCL21891.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative nitroreductase
L3_063_000G1_scaffold_796_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17761..18237
DNA (477bp) protein (159aa)
Phosphoribosylaminoimidazole carboxylase catalytic subunit {ECO:0000313|EMBL:CAJ67039.1}; EC=4.1.1.21 {ECO:0000313|EMBL:CAJ67039.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=187 Tax=Clostridium difficile RepID=C9XIY7_CLODC
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
L3_063_000G1_scaffold_796_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18243..18941
DNA (699bp) protein (233aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=216 Tax=Clostridium difficile RepID=C9XIY8_CLODC
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase
L3_063_000G1_scaffold_796_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18953..20320
DNA (1368bp) protein (456aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Amidophosphoribosyltransferase n=210 Tax=Clostridium difficile RepID=C9XIY9_CLODC
amidophosphoribosyltransferase
L3_063_000G1_scaffold_796_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20314..21390
DNA (1077bp) protein (359aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=93 Tax=Clostridium difficile RepID=C9XIZ0_CLODC
purG; phosphoribosylformylglycinamidine cyclo-ligase
L3_063_000G1_scaffold_796_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21384..21977
DNA (594bp) protein (198aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:CAJ67043.1}; EC=2.1.2.2 {ECO:0000313|EMBL:CAJ67043.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Phosphoribosylglycinamide formyltransferase n=145 Tax=Clostridium difficile RepID=C9XIZ1_CLODC
purN; phosphoribosylglycinamide formyltransferase
L3_063_000G1_scaffold_796_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21970..23502
DNA (1533bp) protein (511aa)
purH; Bifunctional purine biosynthesis protein purH[Includes: Phosphoribosylaminoimidazolecarboxamideformyltransferase ; IMP cyclohydrolase] (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=2 Tax=Clostridium difficile RepID=T4Q0P4_CLODI
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_063_000G1_scaffold_796_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23513..24763
DNA (1251bp) protein (417aa)
purD; Phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000313|EMBL:CAJ67045.1}; EC=6.3.4.13 {ECO:0000313|EMBL:CAJ67045.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Phosphoribosylamine--glycine ligase n=3 Tax=Clostridium difficile RepID=T3AFY8_CLODI
L3_063_000G1_scaffold_796_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24788..28594
DNA (3807bp) protein (1269aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EQI94470.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EQI94470.1};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
purL; Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium difficile P42 RepID=T4Q0D0_CLODI
L3_063_000G1_scaffold_796_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28800..29672
DNA (873bp) protein (291aa)
dTDP-4-dehydrorhamnose reductase n=99 Tax=Clostridium difficile RepID=T2VHY7_CLODI
Spore coat polysaccharide biosynthesis protein spsK {ECO:0000313|EMBL:CCL21900.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
dtdp-4-dehydrorhamnose reductase
L3_063_000G1_scaffold_796_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29781..30650
DNA (870bp) protein (290aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Glucose-1-phosphate thymidylyltransferase n=155 Tax=Clostridium difficile RepID=G6BT75_CLODI
glucose-1-phosphate thymidylyltransferase
L3_063_000G1_scaffold_796_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30699..31256
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EQG78562.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EQG78562.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
dtdp-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=176 Tax=Clostridium difficile RepID=G6BT74_CLODI
L3_063_000G1_scaffold_796_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31294..32277
DNA (984bp) protein (328aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Clostridium difficile 70-100-2010 RepID=G6BT73_CLODI
dtdp-glucose 4,6-dehydratase
L3_063_000G1_scaffold_796_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32253..32975
DNA (723bp) protein (241aa)
Transglycosylase SLT domain protein n=2 Tax=Clostridium difficile RepID=G6BT72_CLODI
transglycosylase
Putative transglycosylase {ECO:0000313|EMBL:CBE01852.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_063_000G1_scaffold_796_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32984..33412
DNA (429bp) protein (143aa)
Uncharacterized protein n=163 Tax=Clostridium difficile RepID=C9XJ00_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22027.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_063_000G1_scaffold_796_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33436..33759
DNA (324bp) protein (108aa)
Surface presentation of antigens family protein n=2 Tax=Clostridium difficile RepID=T4Q1M8_CLODI
Flagellar motor switch protein FliN {ECO:0000313|EMBL:CCL22028.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
fliN; flagellar motor switch protein
Displaying items 1-30 of 105 in total

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