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L3_063_000G1_scaffold_978

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_978_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..916
DNA (915bp) protein (305aa)
Putative thiol-disulfide oxidoreductase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2G8_BACV8
thiol-disulfide oxidoreductase
AhpC/TSA family protein {ECO:0000313|EMBL:KDS55791.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_063_000G1_scaffold_978_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

924..2102
DNA (1179bp) protein (393aa)
Antioxidant, AhpC/TSA family n=2 Tax=Bacteroides vulgatus RepID=D4V3Y0_BACVU
thiol-disulfide oxidoreductase
AhpC/TSA family protein {ECO:0000313|EMBL:KDS29814.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_063_000G1_scaffold_978_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2719..4533
DNA (1815bp) protein (605aa)
Glycoside hydrolase family 2, candidate beta-glycosidase n=2 Tax=Bacteroides vulgatus RepID=A6L2H0_BACV8
Glycoside hydrolase family 2, candidate beta-glycosidase {ECO:0000313|EMBL:ABR39884.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
beta-glycosidase
L3_063_000G1_scaffold_978_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4539..5672
DNA (1134bp) protein (378aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Aldose 1-epimerase n=2 Tax=Bacteroides vulgatus RepID=A6L2H1_BACV8
aldose 1-epimerase
L3_063_000G1_scaffold_978_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5855..9805
DNA (3951bp) protein (1317aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A3Z4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82077.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_063_000G1_scaffold_978_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10121..13120
DNA (3000bp) protein (1000aa)
TonB-dependent receptor plug domain protein n=2 Tax=Bacteroides vulgatus RepID=D4V3Y4_BACVU
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR39887.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_000G1_scaffold_978_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13142..14731
DNA (1590bp) protein (530aa)
SusD family protein n=11 Tax=root RepID=C3Q1T1_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS29809.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
starch-binding protein
L3_063_000G1_scaffold_978_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14811..17444
DNA (2634bp) protein (878aa)
Glycoside hydrolase family 43 n=3 Tax=Bacteroides vulgatus RepID=A6L2H5_BACV8
Glycosyl hydrolases 43 family protein {ECO:0000313|EMBL:KDS55784.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
glycoside hydrolase
L3_063_000G1_scaffold_978_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17453..18421
DNA (969bp) protein (323aa)
Glycoside hydrolase family 43 n=2 Tax=Bacteroides vulgatus RepID=A6L2H6_BACV8
glycoside hydrolase
Glycoside hydrolase family 43 {ECO:0000313|EMBL:ABR39890.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_000G1_scaffold_978_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18418..19302
DNA (885bp) protein (295aa)
Arabinan endo-1,5-alpha-L-arabinosidase {ECO:0000256|PIRNR:PIRNR026534}; EC=3.2.1.99 {ECO:0000256|PIRNR:PIRNR026534};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Arabinan endo-1,5-alpha-L-arabinosidase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCN1_BACVU
glycoside hydrolase
L3_063_000G1_scaffold_978_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19322..21355
DNA (2034bp) protein (678aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L2H8_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EIY82071.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_063_000G1_scaffold_978_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21403..21555)
DNA (153bp) protein (51aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C3Q1S6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82070.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_063_000G1_scaffold_978_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21695..22576
DNA (882bp) protein (294aa)
para-aminobenzoate synthase component I (EC:2.6.1.85)
Para-aminobenzoate synthase component I n=2 Tax=Bacteroides vulgatus RepID=D4VCN4_BACVU
Chorismate binding enzyme family protein {ECO:0000313|EMBL:KDS55779.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_063_000G1_scaffold_978_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22560..23153
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L2I0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39894.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_000G1_scaffold_978_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23243..24385
DNA (1143bp) protein (381aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9A3Y3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS06214.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_063_000G1_scaffold_978_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24382..25578)
DNA (1197bp) protein (399aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides vulgatus RepID=D4VCN7_BACVU
transmembrane transport protein
Putative transmembrane transport protein {ECO:0000313|EMBL:ABR39896.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_000G1_scaffold_978_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(25706..26740)
DNA (1035bp) protein (345aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Phenylalanine--tRNA ligase alpha subunit n=6 Tax=Bacteroides RepID=SYFA_BACV8
L3_063_000G1_scaffold_978_18
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26852..27712
DNA (861bp) protein (287aa)
Uncharacterized protein n=7 Tax=root RepID=C6Z5F7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16116.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_063_000G1_scaffold_978_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27724..28737
DNA (1014bp) protein (338aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=3 Tax=Bacteroides RepID=C6Z5F8_9BACE
UDP-N-acetylenolpyruvoylglucosamine reductase
L3_063_000G1_scaffold_978_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28746..29522
DNA (777bp) protein (259aa)
Metallo-beta-lactamase domain protein n=3 Tax=Bacteroides vulgatus RepID=D4VCP1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY82062.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hydrolase
L3_063_000G1_scaffold_978_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29517..30161)
DNA (645bp) protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Endonuclease III n=6 Tax=Bacteroides RepID=A6L2I7_BACV8
endonuclease III
L3_063_000G1_scaffold_978_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30279..31199
DNA (921bp) protein (307aa)
Amidinotransferase n=13 Tax=Bacteroides RepID=C3Q1R6_9BACE
cytochrome C biogenesis protein CcmF
Putative transferase DdaH family protein {ECO:0000313|EMBL:CDF17122.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_063_000G1_scaffold_978_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31222..32133
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2I9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39903.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_000G1_scaffold_978_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32148..33383
DNA (1236bp) protein (412aa)
rocD; ornithine--oxo-acid aminotransferase (EC:2.6.1.13)
Ornithine--oxo-acid transaminase {ECO:0000313|EMBL:KDS29792.1}; EC=2.6.1.13 {ECO:0000313|EMBL:KDS29792.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Ornithine aminotransferase n=10 Tax=Bacteroides RepID=C3Q1R4_9BACE
L3_063_000G1_scaffold_978_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33672..34358
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9A3X4_BACVU
Conserved hypothetical integral membrane family protein {ECO:0000313|EMBL:KDS55767.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_063_000G1_scaffold_978_26
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34479..35150
DNA (672bp) protein (224aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
7-cyano-7-deazaguanine synthase n=7 Tax=Bacteroides RepID=B6W1I2_9BACE
7-cyano-7-deazaguanine synthase
L3_063_000G1_scaffold_978_27
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35369..35824
DNA (456bp) protein (152aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=9 Tax=Bacteroides RepID=A6L2J3_BACV8
7-cyano-7-deazaguanine reductase
L3_063_000G1_scaffold_978_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36363..38174)
DNA (1812bp) protein (604aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:KDS29788.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KDS29788.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
DNA polymerase III, subunit gamma and tau n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCP9_BACVU
DNA polymerase III
L3_063_000G1_scaffold_978_29
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38293..38589
DNA (297bp) protein (99aa)
Septum formation initiator n=14 Tax=Bacteroides RepID=C3Q1Q8_9BACE
septum formation initiator
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24117.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_063_000G1_scaffold_978_30
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38586..38930
DNA (345bp) protein (115aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L2J6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ23476.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
Displaying items 1-30 of 59 in total

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