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L3_063_000G1_scaffold_1518

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_1518_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..300)
DNA (300bp) protein (100aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UN92_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ72586.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_063_000G1_scaffold_1518_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(351..1178)
DNA (828bp) protein (276aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V7T3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY22505.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
TonB-dependent receptor plug
L3_063_000G1_scaffold_1518_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1658..3406)
DNA (1749bp) protein (583aa)
GDSL-like protein n=2 Tax=Bacteroides caccae RepID=A5ZG69_9BACE
GDSL-like protein {ECO:0000313|EMBL:EDM21179.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative acetylhydrolase
L3_063_000G1_scaffold_1518_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3433..4089)
DNA (657bp) protein (219aa)
Cyclic nucleotide-binding domain protein n=3 Tax=Bacteroides RepID=A5ZG70_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72589.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_063_000G1_scaffold_1518_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4236..4835
DNA (600bp) protein (200aa)
MarC family membrane protein n=3 Tax=Bacteroides RepID=I9Q104_9BACE
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Multiple antibiotic transporter
L3_063_000G1_scaffold_1518_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4733..5476)
DNA (744bp) protein (248aa)
Peptidase, S54 family {ECO:0000313|EMBL:EDM21182.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDM21182.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Peptidase, S54 family n=3 Tax=Bacteroides RepID=A5ZG72_9BACE
hypothetical protein
L3_063_000G1_scaffold_1518_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5691..7628
DNA (1938bp) protein (646aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8V7T8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22510.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Glycogen debranching enzyme
L3_063_000G1_scaffold_1518_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7665..8786
DNA (1122bp) protein (374aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDM21184.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDM21184.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glycosyltransferase, group 1 family protein n=2 Tax=Bacteroides caccae RepID=A5ZG74_9BACE
Glycosyltransferase
L3_063_000G1_scaffold_1518_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8804..10255
DNA (1452bp) protein (484aa)
Glycosyl hydrolase, family 57 n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG75_9BACE
Glycosyl hydrolase, family 57 {ECO:0000313|EMBL:EDM21185.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATP synthase F1 subcomplex epsilon subunit
L3_063_000G1_scaffold_1518_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10421..12109)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21186.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_063_000G1_scaffold_1518_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12129..12836)
DNA (708bp) protein (236aa)
glycogen synthase (UDP-glucose) (EC:2.4.1.21)
Starch synthase catalytic domain protein n=3 Tax=Bacteroides RepID=A5ZG77_9BACE
Starch synthase catalytic domain protein {ECO:0000313|EMBL:EDM21187.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_063_000G1_scaffold_1518_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12933..13754
DNA (822bp) protein (274aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=3 Tax=Bacteroides RepID=A5ZG78_9BACE
L3_063_000G1_scaffold_1518_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13773..14126
DNA (354bp) protein (118aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=3 Tax=Bacteroides RepID=A5ZG79_9BACE
L3_063_000G1_scaffold_1518_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14217..16508)
DNA (2292bp) protein (764aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EDM21190.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EDM21190.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG80_9BACE
bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta
L3_063_000G1_scaffold_1518_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16653..17864)
DNA (1212bp) protein (404aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides RepID=A5ZG81_9BACE
Glucose/galactose transporter warning {ECO:0000313|EMBL:EIY22518.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative sugar transporter
L3_063_000G1_scaffold_1518_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17944..19218)
DNA (1275bp) protein (425aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EDM21192.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EDM21192.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=Bacteroides caccae RepID=A5ZG82_9BACE
L3_063_000G1_scaffold_1518_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19364..19627)
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=3 Tax=Bacteroides RepID=A5ZG85_9BACE
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L27P
L3_063_000G1_scaffold_1518_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19651..19968)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=3 Tax=Bacteroides RepID=A5ZG86_9BACE
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
LSU ribosomal protein L21P
L3_063_000G1_scaffold_1518_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20184..20738)
DNA (555bp) protein (185aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
HAD hydrolase, family IA n=2 Tax=Bacteroides RepID=I8VB60_9BACE
HAD hydrolase family IA {ECO:0000313|EMBL:CCZ72604.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_063_000G1_scaffold_1518_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20859..21743)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q115_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22523.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_063_000G1_scaffold_1518_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21778..22290)
DNA (513bp) protein (171aa)
NlpC/P60 family protein n=2 Tax=Bacteroides caccae RepID=A5ZG90_9BACE
NlpC/P60 family protein {ECO:0000313|EMBL:EDM21200.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
lipoprotein
L3_063_000G1_scaffold_1518_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22321..23025)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=A5ZG91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22525.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC-type multidrug transport system, ATPase component
L3_063_000G1_scaffold_1518_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23064..24557)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21202.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_063_000G1_scaffold_1518_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24574..27411)
DNA (2838bp) protein (946aa)
Predicted Zn-dependent peptidases (EC:3.4.99.-)
Peptidase M16 inactive domain protein n=2 Tax=Bacteroides caccae RepID=A5ZG93_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22527.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_063_000G1_scaffold_1518_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27491..28291)
DNA (801bp) protein (267aa)
3-deoxy-8-phosphooctulonate synthase (EC:2.5.1.55)
3-deoxy-8-phosphooctulonate synthase n=3 Tax=Bacteroides RepID=A5ZG94_9BACE
3-deoxy-8-phosphooctulonate synthase {ECO:0000313|EMBL:EIY22528.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_063_000G1_scaffold_1518_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28371..29297)
DNA (927bp) protein (309aa)
Lipid kinase, YegS/Rv2252/BmrU family n=2 Tax=Bacteroides caccae RepID=A5ZG95_9BACE
YegS//BmrU family lipid kinase {ECO:0000313|EMBL:EIY22529.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
L3_063_000G1_scaffold_1518_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29355..30275)
DNA (921bp) protein (307aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=2 Tax=Bacteroides RepID=A5ZG96_9BACE
L3_063_000G1_scaffold_1518_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30728..31720)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21207.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_063_000G1_scaffold_1518_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31742..32221)
DNA (480bp) protein (160aa)
SusD family protein n=2 Tax=Bacteroides RepID=A5ZG98_9BACE
SusD family protein {ECO:0000313|EMBL:CCZ72614.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RagB/SusD family protein
L3_063_000G1_scaffold_1518_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32227..33570)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VB71_9BACE
SusD family protein {ECO:0000313|EMBL:CCZ72614.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
SusD family.
Displaying items 1-30 of 59 in total

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