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L3_063_000G1_scaffold_1783

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_1783_1
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..973
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NYZ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17322.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_063_000G1_scaffold_1783_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

999..3353
DNA (2355bp) protein (785aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KXD0_BACV8
Uncharacterized protein {ECO:0000313|EMBL:ABR38094.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_063_000G1_scaffold_1783_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3350..5707
DNA (2358bp) protein (786aa)
Outer membrane protein, OMP85 family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V526_BACVU
Surface antigen family protein {ECO:0000313|EMBL:KDS28195.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
membrane protein
L3_063_000G1_scaffold_1783_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5842..6753
DNA (912bp) protein (304aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=A6KXC8_BACV8
nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:KDS54929.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_063_000G1_scaffold_1783_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6857..7759)
DNA (903bp) protein (301aa)
Transcriptional regulator n=7 Tax=Bacteroides RepID=A6KXC7_BACV8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABR38091.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_000G1_scaffold_1783_6
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7971..8651
DNA (681bp) protein (227aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6KXC6_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17326.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_063_000G1_scaffold_1783_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8798..12667
DNA (3870bp) protein (1290aa)
Sensor histidine kinase/response regulator n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7V0_BACVU
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:EFG18064.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_063_000G1_scaffold_1783_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12832..14436
DNA (1605bp) protein (535aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7U9_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG18063.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_063_000G1_scaffold_1783_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14558..15172
DNA (615bp) protein (205aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843, ECO:0000256|SAAS:SAAS00038056}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843, ECO:0000256|SAAS:SAAS00037921};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=7 Tax=Bacteroides RepID=A6KXB6_BACV8
3,4-dihydroxy-2-butanone 4-phosphate synthase
L3_063_000G1_scaffold_1783_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15184..15939
DNA (756bp) protein (252aa)
Transcriptional regulator of sugar metabolism n=15 Tax=root RepID=A6KXB5_BACV8
alkaline phosphatase
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:CDF17330.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_063_000G1_scaffold_1783_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16283..17128
DNA (846bp) protein (282aa)
Transketolase, N-terminal subunit n=4 Tax=Bacteroides RepID=A6KXB4_BACV8
transketolase
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDF17331.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_063_000G1_scaffold_1783_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17130..18056
DNA (927bp) protein (309aa)
Transketolase, C-terminal subunit n=2 Tax=Bacteroides vulgatus RepID=A6KXB3_BACV8
transketolase
Transketolase, C-terminal subunit {ECO:0000313|EMBL:ABR38077.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_000G1_scaffold_1783_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18082..19578
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000313|EMBL:KDS28180.1}; EC=2.7.1.30 {ECO:0000313|EMBL:KDS28180.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glycerol kinase 2 n=2 Tax=Bacteroides vulgatus RepID=A6KXB2_BACV8
glycerol kinase
L3_063_000G1_scaffold_1783_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19612..21036
DNA (1425bp) protein (475aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6KXB1_BACV8
hypothetical protein
L-fucose isomerase, C-terminal domain protein {ECO:0000313|EMBL:KDS28179.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_063_000G1_scaffold_1783_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21049..22065
DNA (1017bp) protein (339aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6Z740_9BACE
integral membrane protein
Ureide permease family protein {ECO:0000313|EMBL:KDS54918.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_063_000G1_scaffold_1783_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22103..22921
DNA (819bp) protein (273aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=3 Tax=root RepID=D4V7U1_BACVU
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:KDS54917.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
sugar ABC transporter
L3_063_000G1_scaffold_1783_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


23080..24444
DNA (1365bp) protein (455aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000255|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00127}; Short=HisRS {ECO:0000255|HAMAP-Rule:MF_00127};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Histidine--tRNA ligase n=2 Tax=Bacteroides vulgatus RepID=SYH_BACV8
L3_063_000G1_scaffold_1783_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25024..26214)
DNA (1191bp) protein (397aa)
Small GTP-binding protein domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7T9_BACVU
Small GTP-binding protein domain protein {ECO:0000313|EMBL:EFG18053.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
GTPase
L3_063_000G1_scaffold_1783_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26278..27696)
DNA (1419bp) protein (473aa)
Thiamine biosynthesis protein ThiH n=7 Tax=Bacteroides RepID=A6KXA4_BACV8
thiH; thiamine biosynthesis protein ThiH
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EET17786.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_063_000G1_scaffold_1783_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27709..28743)
DNA (1035bp) protein (345aa)
biotin synthase (EC:2.8.1.6)
Biotin synthase n=7 Tax=root RepID=A6KXA3_BACV8
[FeFe] hydrogenase H-cluster radical SAM maturase HydE {ECO:0000313|EMBL:KDS28172.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_063_000G1_scaffold_1783_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28752..30503)
DNA (1752bp) protein (584aa)
4Fe-4S binding domain protein n=4 Tax=Bacteroides RepID=C6ZA79_9BACE
[FeFe] hydrogenase, group B1/B3 {ECO:0000313|EMBL:EOS00135.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hydrogenase
L3_063_000G1_scaffold_1783_22
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30599..30871
DNA (273bp) protein (91aa)
10 kDa chaperonin n=16 Tax=Bacteroides RepID=CH10_BACV8
molecular chaperone GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_063_000G1_scaffold_1783_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30913..32550
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=21 Tax=root RepID=CH60_BACV8
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
groEL; molecular chaperone GroEL
L3_063_000G1_scaffold_1783_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32994..34376
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TWB4_BACVU
MATE efflux family protein {ECO:0000313|EMBL:EIY74016.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
transmembrane cation efflux protein
L3_063_000G1_scaffold_1783_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34412..34996
DNA (585bp) protein (195aa)
Cyclic nucleotide-binding domain protein n=4 Tax=Bacteroides RepID=D4V7T2_BACVU
regulatory protein
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:KDS54898.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_063_000G1_scaffold_1783_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34993..35112
DNA (120bp) protein (40aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7T1_BACVU
Putative membrane protein {ECO:0000313|EMBL:KDS26267.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_063_000G1_scaffold_1783_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35187..35726
DNA (540bp) protein (180aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX97_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR38061.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_063_000G1_scaffold_1783_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35851..37266)
DNA (1416bp) protein (472aa)
Glycosyl hydrolase {ECO:0000313|EMBL:KDS54895.1}; EC=3.2.1.- {ECO:0000313|EMBL:KDS54895.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Glycosyl hydrolase family 109 protein 1 n=3 Tax=root RepID=G1091_BACV8
oxidoreductase
L3_063_000G1_scaffold_1783_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37539..37649)
DNA (111bp) protein (37aa)
Uncharacterized protein n=2 Tax=root RepID=G1UMW0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27416.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_063_000G1_scaffold_1783_30
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37696..37899
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HUZ7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB38084.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
Displaying items 1-30 of 75 in total

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