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L3_063_000G1_scaffold_52

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Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_52_1
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..375
DNA (375bp) protein (125aa)
N-acetylmuramoyl-L-alanine amidase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VER1_CLOBI
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:EQK39137.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
PPIC-type PPIASE domain protein
L3_063_000G1_scaffold_52_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

481..1446
DNA (966bp) protein (322aa)
NAD binding domain of 6-phosphogluconate dehydrogenase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQA4_CLOBI
NAD binding domain of 6-phosphogluconate dehydrogenase family protein {ECO:0000313|EMBL:EQK43300.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
ornithine cyclodeaminase
L3_063_000G1_scaffold_52_3
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1485..2369)
DNA (885bp) protein (295aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VDE7_CLOBI
AraC family transcriptional regulator {ECO:0000313|EMBL:KGJ48282.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
AraC family transcriptional regulator
L3_063_000G1_scaffold_52_4
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2581..3828
DNA (1248bp) protein (416aa)
Dicarboxylate symporter family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V621_CLOBI
Dicarboxylate symporter family protein {ECO:0000313|EMBL:EQK39134.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
sodium:proton antiporter
L3_063_000G1_scaffold_52_5
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4017..5174
DNA (1158bp) protein (386aa)
Major Facilitator Superfamily protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VCF9_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48284.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
YwbF
L3_063_000G1_scaffold_52_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5324..5887
DNA (564bp) protein (188aa)
Helix-turn-helix family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEQ8_CLOBI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQK39132.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
transcriptional regulator
L3_063_000G1_scaffold_52_7
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5908..6819
DNA (912bp) protein (304aa)
pflE; Pyruvate formate-lyase (activating enzyme) (EC:1.97.1.4)
Glycyl-radical enzyme activating family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEH0_CLOBI
Ferredoxin {ECO:0000313|EMBL:KGJ48286.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_000G1_scaffold_52_8
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6824..9193
DNA (2370bp) protein (790aa)
pflD; Pyruvate formate-lyase (EC:2.3.1.54)
Pyruvate formate lyase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VDE4_CLOBI
Formate acetyltransferase {ECO:0000313|EMBL:KGJ48287.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_000G1_scaffold_52_9
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9309..10115
DNA (807bp) protein (269aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V617_CLOBI
pyrroline-5-carboxylate reductase
L3_063_000G1_scaffold_52_10
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10239..10619)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VCF5_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK39128.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L3_063_000G1_scaffold_52_11
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10638..11288)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEQ2_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48290.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_000G1_scaffold_52_12
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11481..12914
DNA (1434bp) protein (478aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEG7_CLOBI
L3_063_000G1_scaffold_52_13
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13117..14007
DNA (891bp) protein (297aa)
Oxidoreductase NAD-binding domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VDD9_CLOBI
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:EQK39125.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
ferredoxin-NADP(+) reductase subunit alpha
L3_063_000G1_scaffold_52_14
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14010..15410
DNA (1401bp) protein (467aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EQK39124.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EQK39124.1};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
aspB1; putative glutamate synthase (EC:1.4.1.13)
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Clostridium bifermentans RepID=T4V612_CLOBI
L3_063_000G1_scaffold_52_15
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15455..16063)
DNA (609bp) protein (203aa)
NUDIX domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VCE9_CLOBI
NUDIX hydrolase {ECO:0000313|EMBL:KGJ48294.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
NUDIX family hydrolase
L3_063_000G1_scaffold_52_16
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16279..17373
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEP8_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK39122.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L3_063_000G1_scaffold_52_17
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17394..17999)
DNA (606bp) protein (202aa)
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEG3_CLOBI
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein {ECO:0000313|EMBL:EQK39121.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
Peptidylprolyl isomerase
L3_063_000G1_scaffold_52_18
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18137..18673
DNA (537bp) protein (179aa)
Rubrerythrin family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VDD2_CLOBI
Rubrerythrin family protein {ECO:0000313|EMBL:EQK39120.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
rubrerythrin
L3_063_000G1_scaffold_52_19
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18701..19858
DNA (1158bp) protein (386aa)
Amidohydrolase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V607_CLOBI
Amidohydrolase family protein {ECO:0000313|EMBL:EQK39119.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
amidohydrolase
L3_063_000G1_scaffold_52_20
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20011..21648
DNA (1638bp) protein (546aa)
Bacterial extracellular solute-binding s, 5 Middle family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VCE5_CLOBI
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:EQK39118.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
family 5 extracellular solute-binding protein
L3_063_000G1_scaffold_52_21
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21767..22249)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEP4_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK39117.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L3_063_000G1_scaffold_52_22
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22479..25274
DNA (2796bp) protein (932aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEF8_CLOBI
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
mutS; DNA mismatch repair protein
L3_063_000G1_scaffold_52_23
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25337..27310
DNA (1974bp) protein (658aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VDC7_CLOBI
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
mutL; DNA mismatch repair protein
L3_063_000G1_scaffold_52_24
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27399..28340
DNA (942bp) protein (314aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
miaA; transfer RNA delta(2)-isopentenylpyrophosphatetransferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V5Z6_CLOBI
L3_063_000G1_scaffold_52_25
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28398..28709
DNA (312bp) protein (104aa)
RNA-binding protein Hfq n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VR82_CLOBI
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hfQ; HfQ protein
L3_063_000G1_scaffold_52_26
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28918..31407
DNA (2490bp) protein (830aa)
cdr1; coenzyme A disulfide reductase Cdr (EC:1.8.1.14)
CoA-disulfide reductase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEN7_CLOBI
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGJ48301.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
L3_063_000G1_scaffold_52_27
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31558..32595
DNA (1038bp) protein (346aa)
AAA ATPase domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VHS9_CLOBI
AAA ATPase domain protein {ECO:0000313|EMBL:EQK43274.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
AAA ATPase
L3_063_000G1_scaffold_52_28
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32592..33365
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VP39_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK43273.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_000G1_scaffold_52_29
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33530..34345
DNA (816bp) protein (272aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRG1_CLOBI
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EQK43272.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
ATP-binding protein
L3_063_000G1_scaffold_52_30
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34582..36156
DNA (1575bp) protein (525aa)
C4-dicarboxylate anaerobic carrier family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEM3_CLOBI
C4-dicarboxylate anaerobic carrier family protein {ECO:0000313|EMBL:EQK39107.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
AbgT transporter
Displaying items 1-30 of 178 in total

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