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L3_063_000G1_scaffold_908

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_908_1
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(235..1338)
DNA (1104bp) protein (368aa)
Helicase conserved C-terminal domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W3E4_CLOBI
RNA helicase {ECO:0000313|EMBL:KGJ48139.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
DEAD/DEAH box helicase
L3_063_000G1_scaffold_908_2
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1613..2317)
DNA (705bp) protein (235aa)
Helix-turn-helix domain, rpiR family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W478_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48140.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
SIS domain-containing protein
L3_063_000G1_scaffold_908_3
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2391..3005
DNA (615bp) protein (205aa)
MgsA AAA+ ATPase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W483_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:KGJ48141.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_000G1_scaffold_908_4
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3039..4382
DNA (1344bp) protein (448aa)
PTS system, lactose/cellobiose IIC component family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VLC8_CLOBI
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
PTS lactose/cellobiose IIC component
L3_063_000G1_scaffold_908_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4414..5037)
DNA (624bp) protein (208aa)
Putative sporulation protein YtaF n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W4R2_CLOBI
Putative sporulation protein YtaF {ECO:0000313|EMBL:EQK47907.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
sporulation protein YtaF
L3_063_000G1_scaffold_908_6
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5139..5459)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Clostridium sordellii RepID=T0CSJ0_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KGJ48143.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
protein of unknown function (DUF1540)
L3_063_000G1_scaffold_908_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5867..7375
DNA (1509bp) protein (503aa)
UPF0371 protein C672_0499 n=2 Tax=Clostridium bifermentans RepID=T4VUP9_CLOBI
UPF0371 protein C671_0594 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L3_063_000G1_scaffold_908_8
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7449..8534
DNA (1086bp) protein (362aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
DNA polymerase IV n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VUY4_CLOBI
dinB; DNA polymerase IV
L3_063_000G1_scaffold_908_9
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8674..10071
DNA (1398bp) protein (466aa)
MATE efflux family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W3E8_CLOBI
Multidrug transporter MatE {ECO:0000313|EMBL:KGJ48146.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
mate efflux family protein
L3_063_000G1_scaffold_908_10
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10191..10904
DNA (714bp) protein (238aa)
PHP domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W2Q8_CLOBI
PHP domain protein {ECO:0000313|EMBL:EQK47888.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
PHP domain protein
L3_063_000G1_scaffold_908_11
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11006..12235
DNA (1230bp) protein (410aa)
S1 RNA binding domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VTS3_CLOBI
S1 RNA binding domain protein {ECO:0000313|EMBL:EQK44525.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
30S ribosomal protein S1
L3_063_000G1_scaffold_908_12
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12750..12944
DNA (195bp) protein (65aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VUQ4_CLOBI
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:KGJ48149.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
thiamine biosynthesis protein
L3_063_000G1_scaffold_908_13
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12946..13749
DNA (804bp) protein (268aa)
Thiamine biosynthesis protein ThiF n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VUY9_CLOBI
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EQK44527.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
thiF; Thiamine biosynthesis protein ThiF
L3_063_000G1_scaffold_908_14
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13762..14538
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
thiG; Thiazole biosynthesis protein ThiG (EC:4.-.-.-)
Thiazole synthase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSR9_CLOBI
L3_063_000G1_scaffold_908_15
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14541..15656
DNA (1116bp) protein (372aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VLD7_CLOBI
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EQK44529.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
thiH; thiamine biosynthesis protein ThiH
L3_063_000G1_scaffold_908_16
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15644..16231
DNA (588bp) protein (196aa)
Thiamine monophosphate synthase/TENI family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VTS8_CLOBI
Thiamine monophosphate synthase/TENI family protein {ECO:0000313|EMBL:EQK44530.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
thiamine biosynthesis protein
L3_063_000G1_scaffold_908_17
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16400..17713
DNA (1314bp) protein (438aa)
cysteine desulfurase (EC:2.8.1.7)
Aminotransferase class-V family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W2P3_CLOBI
Aminotransferase class-V family protein {ECO:0000313|EMBL:EQK47873.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
L3_063_000G1_scaffold_908_18
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17767..18219
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VUZ3_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK44532.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L3_063_000G1_scaffold_908_19
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18360..19751
DNA (1392bp) protein (464aa)
MATE efflux family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSS4_CLOBI
MATE efflux family protein {ECO:0000313|EMBL:EQK44533.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
drug/sodium antiporter
L3_063_000G1_scaffold_908_20
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19964..21964
DNA (2001bp) protein (667aa)
UPF0313 protein C672_0512 n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VLE2_CLOBI
UPF0313 protein C672_0512 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L3_063_000G1_scaffold_908_21
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22176..22730
DNA (555bp) protein (185aa)
UPF0397 protein C671_0608 n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W3C3_CLOBI
UPF0397 protein KD33_16370 {ECO:0000256|HAMAP-Rule:MF_01572}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
L3_063_000G1_scaffold_908_22
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22743..24449
DNA (1707bp) protein (569aa)
Heme ABC exporter, ATP-binding protein CcmA {ECO:0000313|EMBL:EQK44536.1}; EC=3.6.3.41 {ECO:0000313|EMBL:EQK44536.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
putative ABC transporter ATP-binding protein (EC:3.6.3.-)
Heme ABC exporter, ATP-binding protein CcmA n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VUR4_CLOBI
L3_063_000G1_scaffold_908_23
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24446..25276
DNA (831bp) protein (277aa)
Cobalt transport family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VUZ7_CLOBI
Cobalt transport family protein {ECO:0000313|EMBL:EQK44537.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L3_063_000G1_scaffold_908_24
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25374..26552)
DNA (1179bp) protein (393aa)
Iron-containing alcohol dehydrogenase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VST1_CLOBI
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:EQK44538.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
iron-containing alcohol dehydrogenase
L3_063_000G1_scaffold_908_25
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26728..27099
DNA (372bp) protein (124aa)
MerR regulatory family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VLE8_CLOBI
MerR regulatory family protein {ECO:0000313|EMBL:EQK44539.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
putative transcriptional regulator
L3_063_000G1_scaffold_908_26
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27154..27633
DNA (480bp) protein (160aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VTT7_CLOBI
regulatory protein
L3_063_000G1_scaffold_908_27
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27663..28277
DNA (615bp) protein (205aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Putative 3-methyladenine DNA glycosylase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VUS0_CLOBI
putative 3-methyladenine DNA glycosylase
L3_063_000G1_scaffold_908_28
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28350..29270)
DNA (921bp) protein (307aa)
Membrane transport family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VV01_CLOBI
Membrane transport family protein {ECO:0000313|EMBL:EQK44542.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
transporter
L3_063_000G1_scaffold_908_29
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29607..30461
DNA (855bp) protein (285aa)
fumarate hydratase (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VST7_CLOBI
Hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein {ECO:0000313|EMBL:EQK44543.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_000G1_scaffold_908_30
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30474..31004
DNA (531bp) protein (177aa)
Hydrolyase, tartrate beta subunit/fumarate, Fe-S type domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VLF4_CLOBI
Hydrolyase, tartrate beta subunit/fumarate, Fe-S type domain protein {ECO:0000313|EMBL:EQK44544.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
fumB; fumarate hydratase subunit B
Displaying items 1-30 of 45 in total

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