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L3_063_000G1_scaffold_1213

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_1213_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

395..1318
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002E67957
Conjugative transposon protein {ECO:0000313|EMBL:CEQ26737.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
bacteriophage-like protein
L3_063_000G1_scaffold_1213_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1697..1906
DNA (210bp) protein (70aa)
Putative phage protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VN20_CLOBI
Putative phage protein {ECO:0000313|EMBL:EQK42898.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L3_063_000G1_scaffold_1213_3
unknown

Not on your lists

2045..2320
DNA (276bp) protein (92aa)

This feature has no annotations

L3_063_000G1_scaffold_1213_4
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2839..5280)
DNA (2442bp) protein (814aa)
AAA-like domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VP41_CLOBI
AAA-like domain protein {ECO:0000313|EMBL:EQK42900.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L3_063_000G1_scaffold_1213_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5293..5616)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQD8_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK42902.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_000G1_scaffold_1213_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5629..6069)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VN24_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK42903.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_000G1_scaffold_1213_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6163..6336)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VGQ9_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK42904.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_000G1_scaffold_1213_8
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6435..6845)
DNA (411bp) protein (137aa)
Uncharacterised protein {ECO:0000313|EMBL:CEQ26750.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6963..8417)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VQ68_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK42906.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_000G1_scaffold_1213_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8479..12963)
DNA (4485bp) protein (1495aa)
Putative phage tail tape measure protein, family, core region domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2P5_CLOPF
Phage tail tape measure protein {ECO:0000313|EMBL:CEN75431.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
phage tail tape measure protein, TP901 family
L3_063_000G1_scaffold_1213_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13219..13551)
DNA (333bp) protein (111aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T3HSU7_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CEN94703.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_12
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13569..14084)
DNA (516bp) protein (172aa)
Phage major tail , phi13 family protein n=2 Tax=Clostridium difficile RepID=T3MB90_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CEN94701.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14142..14702)
DNA (561bp) protein (187aa)
Phage major tail , phi13 family protein n=7 Tax=Clostridium difficile RepID=T2VVB9_CLODI
Phage major tail protein {ECO:0000313|EMBL:CEN94276.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
phage major tail protein, phi13 family
L3_063_000G1_scaffold_1213_14
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14761..15087)
DNA (327bp) protein (109aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T2VVZ7_CLODI
Uncharacterised protein {ECO:0000313|EMBL:CEN75435.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15092..15475)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P59 RepID=T4SMJ0_CLODI
Phage protein {ECO:0000313|EMBL:CEN94695.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_16
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15475..15792)
DNA (318bp) protein (106aa)
Phage head-tail adaptor protein {ECO:0000313|EMBL:CEN75437.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15792..16100)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J087_9FIRM
Phage gp6-like head-tail connector protein {ECO:0000313|EMBL:CEN75438.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16100..16351)
DNA (252bp) protein (84aa)
Uncharacterised protein {ECO:0000313|EMBL:CEQ26763.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_19
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16411..17493)
DNA (1083bp) protein (361aa)
Phage major capsid protein, HK97 family n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5US61_CLOBO
Phage major capsid protein {ECO:0000313|EMBL:CEN94688.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
capsid protein
L3_063_000G1_scaffold_1213_20

Not on your lists

comp(17555..18289)
DNA (735bp) protein (245aa)
Clp protease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDU1_9CLOT
Prohead Clp protease {ECO:0000313|EMBL:AJA42860.1}; TaxID=1567011 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT19406C.;"
serine protease
L3_063_000G1_scaffold_1213_21
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18325..19242)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQW0_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR48578.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L3_063_000G1_scaffold_1213_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19293..20555)
DNA (1263bp) protein (421aa)
Phage portal protein n=1 Tax=Bacillus subtilis subsp. subtilis str. NCIB 3610 RepID=S5DW15_BACIU
Phage portal protein {ECO:0000313|EMBL:CEN94292.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
phage portal protein, HK97 family
L3_063_000G1_scaffold_1213_23
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20568..22274)
DNA (1707bp) protein (569aa)
Phage terminase large subunit n=2 Tax=Bacillus subtilis RepID=S5DQ44_BACIU
terminase
Phage terminase large subunit {ECO:0000313|EMBL:AGQ21265.1}; TaxID=535026 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. subtilis str. NCIB 3610.;"
L3_063_000G1_scaffold_1213_24
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22296..22748)
DNA (453bp) protein (151aa)
Uncharacterised protein {ECO:0000313|EMBL:CEN75444.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_25
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22922..23329)
DNA (408bp) protein (136aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=I2E873_9BACT
Gp54 protein {ECO:0000313|EMBL:CEN94300.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
HNH endonuclease.
L3_063_000G1_scaffold_1213_26
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23329..23592)
DNA (264bp) protein (88aa)
Uncharacterised protein {ECO:0000313|EMBL:CEN75446.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1213_27
unknown

Not on your lists

comp(23638..23808)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_063_000G1_scaffold_1213_28
unknown

Not on your lists

comp(23810..23995)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_063_000G1_scaffold_1213_29
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23996..24283)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VN40_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK42923.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L3_063_000G1_scaffold_1213_30
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24285..24566)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VGS9_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:CEK33570.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Displaying items 1-30 of 41 in total

View Taxonomy