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L3_063_000G1_scaffold_5338

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_5338_1
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..98
DNA (96bp) protein (32aa)
Elongation factor Tu n=4 Tax=Clostridium bifermentans RepID=T4VSC1_CLOBI
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
elongation factor Tu
L3_063_000G1_scaffold_5338_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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317..466
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=4 Tax=unclassified Peptostreptococcaceae RepID=T0CUV3_CLOSO
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
rpmG; 50S ribosomal protein L33
L3_063_000G1_scaffold_5338_3
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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492..713
DNA (222bp) protein (74aa)
Protein translocase subunit SecE n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4W0L8_CLOBI
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
preprotein translocase SecE subunit
L3_063_000G1_scaffold_5338_4
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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729..1274
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4W0Y5_CLOBI
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
nusG; transcription antitermination protein
L3_063_000G1_scaffold_5338_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1304..1729
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=3 Tax=unclassified Peptostreptococcaceae RepID=T0D4D9_CLOSO
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
rplK; 50S ribosomal protein L11
L3_063_000G1_scaffold_5338_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1807..2505
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSD9_CLOBI
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
rplA; 50S ribosomal protein L1
L3_063_000G1_scaffold_5338_7
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2723..3226
DNA (504bp) protein (168aa)
50S ribosomal protein L10 n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VZT5_CLOBI
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
rplJ; 50S ribosomal protein L10
L3_063_000G1_scaffold_5338_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3297..3659
DNA (363bp) protein (121aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4W0N6_CLOBI
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
rplL; 50S ribosomal protein L7/L12
L3_063_000G1_scaffold_5338_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3925..7623
DNA (3699bp) protein (1233aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4W103_CLOBI
L3_063_000G1_scaffold_5338_10
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7667..8965
DNA (1299bp) protein (433aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W667_CLOBI
rpoC; DNA-directed RNA polymerase subunit beta'
Displaying 10 items

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