ggKbase home page

L3_063_000G1_scaffold_960

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_960_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..115
DNA (114bp) protein (38aa)
ABC transporter permease (Fragment) n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C833_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50514.1}; Flags: Fragment;; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter permease
L3_063_000G1_scaffold_960_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

417..1781
DNA (1365bp) protein (455aa)
PTS system, glucose-like IIB component domain protein (EC:2.7.1.69)
PTS system, glucose-like IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFA7_9CLOT
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EEH98515.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_063_000G1_scaffold_960_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1881..3227
DNA (1347bp) protein (449aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hom2; homoserine dehydrogenase (EC:1.1.1.3)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH11_9CLOT
L3_063_000G1_scaffold_960_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3390..3704
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H806_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98513.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative rhodanese-like domain-containingprotein
L3_063_000G1_scaffold_960_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4110..4571
DNA (462bp) protein (154aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3H7_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
infC; translation initiation factor IF-3
L3_063_000G1_scaffold_960_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4592..4789
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4C6_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
50S ribosomal protein L35
L3_063_000G1_scaffold_960_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4816..5172
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFA4_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rplT; 50S ribosomal protein L20
L3_063_000G1_scaffold_960_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5395..6294
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98509.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
patatin-like phospholipase family protein
L3_063_000G1_scaffold_960_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6725..6907)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H804_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98508.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_960_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7234..8991
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3H6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98507.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ATP-dependent RNA helicase, superfamily II
L3_063_000G1_scaffold_960_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9049..10365)
DNA (1317bp) protein (439aa)
MATE efflux family protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4C5_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEH98506.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
drug/sodium antiporter
L3_063_000G1_scaffold_960_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10529..10945
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98505.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_960_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11019..11156
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98504.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_960_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11492..12265
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H803_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98503.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_960_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12412..12795
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3H5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98502.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_960_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13344..13589
DNA (246bp) protein (82aa)
Putative iron-only hydrogenase system regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4C4_9CLOT
Putative iron-only hydrogenase system regulator {ECO:0000313|EMBL:EEH98501.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_960_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13671..14798
DNA (1128bp) protein (376aa)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF96_9CLOT
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:EEH98500.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE
L3_063_000G1_scaffold_960_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14824..16200
DNA (1377bp) protein (459aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH07_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EEH98499.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG
L3_063_000G1_scaffold_960_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16213..17421
DNA (1209bp) protein (403aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H802_9CLOT
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:EEH98498.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hydF; Hydrogenase maturation GTPase HydF
L3_063_000G1_scaffold_960_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17452..18696
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98497.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
oxidoreductase
L3_063_000G1_scaffold_960_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18929..19855
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4C3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98496.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative PucR family transcriptional regulator
L3_063_000G1_scaffold_960_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19941..20504)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98495.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative chromate transporter
L3_063_000G1_scaffold_960_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20497..21078)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98494.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
chromate transporter
L3_063_000G1_scaffold_960_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21199..22074
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H800_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98493.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative transcriptional regulator
L3_063_000G1_scaffold_960_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22167..22511
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3H2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98492.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_960_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22588..24324)
DNA (1737bp) protein (579aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Adenine deaminase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4C2_9CLOT
ade; adenine deaminase
L3_063_000G1_scaffold_960_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24602..25519
DNA (918bp) protein (306aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
metA; homoserine O-succinyltransferase MetA (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF85_9CLOT
L3_063_000G1_scaffold_960_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25645..26166
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98489.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_063_000G1_scaffold_960_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26309..26707
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7Z9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98488.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_960_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26839..27531
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3H1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98487.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cyclic nucleotide-binding domain protein
Displaying items 1-30 of 45 in total

View Taxonomy