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L3_063_000G1_scaffold_1007

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_1007_1
unknown

Not on your lists

2..235
DNA (234bp) protein (78aa)
Phage protein, HK97 gp10 family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2P1_CLOPF
L3_063_000G1_scaffold_1007_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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232..564
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T2RGL9_CLOSO
Uncharacterised protein {ECO:0000313|EMBL:CEN94697.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1007_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

568..1218
DNA (651bp) protein (217aa)
Phage major tail protein, Phi13 family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2P3_CLOPF
Phage major tail protein, Phi13 family {ECO:0000313|EMBL:EDT71935.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_063_000G1_scaffold_1007_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1242..1772
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T2RGL6_CLOSO
Uncharacterised protein {ECO:0000313|EMBL:CEN73036.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_063_000G1_scaffold_1007_5
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1787..5686
DNA (3900bp) protein (1300aa)
Phage tail tape measure protein, family, core region n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F2D5_CLOSG
Phage tail tape measure protein, family, core region {ECO:0000313|EMBL:EHN14512.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
phage tail tape measure protein, family, core region
L3_063_000G1_scaffold_1007_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5679..6404
DNA (726bp) protein (242aa)
Putative phage tail component, N-domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2P6_CLOPF
Putative phage tail component, N-domain protein {ECO:0000313|EMBL:EDT71885.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_063_000G1_scaffold_1007_7

Not on your lists

6425..8392
DNA (1968bp) protein (656aa)
Phage minor structural protein, N-region n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2P7_CLOPF
Phage minor structural protein, N-region {ECO:0000313|EMBL:ETJ19142.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
pblB; phage SPP1 structural protein
L3_063_000G1_scaffold_1007_8
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8421..9929
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3D9W5_CLODI
Collagen triple helix repeat (20 copies) {ECO:0000313|EMBL:CEK29422.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_063_000G1_scaffold_1007_9
unknown

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9942..10364
DNA (423bp) protein (141aa)

This feature has no annotations

L3_063_000G1_scaffold_1007_10
unknown

Not on your lists

10366..10503
DNA (138bp) protein (46aa)

This feature has no annotations

L3_063_000G1_scaffold_1007_11
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10581..11885
DNA (1305bp) protein (435aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AUZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJK42724.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
L3_063_000G1_scaffold_1007_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11960..12337
DNA (378bp) protein (126aa)
Holin n=2 Tax=root RepID=Q8SBN5_9CAUD
Holin {ECO:0000313|EMBL:EDT22884.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
holin
L3_063_000G1_scaffold_1007_13
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12371..13048
DNA (678bp) protein (226aa)
Phage regulatory protein, Rha family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EET87815.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
antirepressor protein
L3_063_000G1_scaffold_1007_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13112..13870
DNA (759bp) protein (253aa)
N-acetylmuramoyl-L-alanine amidase domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C029_9CLOT
N-acetylmuramoyl-L-alanine amidase domain-containing protein {ECO:0000313|EMBL:EOR20571.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
peptidoglycan hydrolase
L3_063_000G1_scaffold_1007_15
unknown

Not on your lists

comp(14465..14662)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_063_000G1_scaffold_1007_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14821..15492
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8J7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT23453.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_063_000G1_scaffold_1007_17
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15538..15756)
DNA (219bp) protein (73aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EJ63_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG28528.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
transcriptional regulator, XRE family
L3_063_000G1_scaffold_1007_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15872..16627
DNA (756bp) protein (252aa)
DNA adenine-specific methyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K739_CLOBU
Putative modification methylase dpniia {ECO:0000313|EMBL:KJZ86912.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DNA adenine methylase
L3_063_000G1_scaffold_1007_19
unknown

Not on your lists

16650..16802
DNA (153bp) protein (51aa)

This feature has no annotations

L3_063_000G1_scaffold_1007_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16915..17400
DNA (486bp) protein (162aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RB92_CLOPF
ybaK/ebsC protein
L3_063_000G1_scaffold_1007_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17492..18349
DNA (858bp) protein (286aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Modification methylase n=23 Tax=Streptococcus agalactiae RepID=S8I6E1_STRAG
modification methylase
L3_063_000G1_scaffold_1007_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18330..19670
DNA (1341bp) protein (447aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LX70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31467.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_063_000G1_scaffold_1007_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19752..19901
DNA (150bp) protein (50aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
YbaK/ebsC protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HE04_9CLOT
aminoacyl-tRNA editing domain protein
L3_063_000G1_scaffold_1007_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20095..20988)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3J9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97733.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_1007_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21224..22906)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97734.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_1007_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23070..24011
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H794_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97735.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_063_000G1_scaffold_1007_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24322..25707
DNA (1386bp) protein (462aa)
hydA; phenylhydantoinase (EC:3.5.2.2)
Dihydropyrimidinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFZ2_9CLOT
Dihydropyrimidinase {ECO:0000313|EMBL:EEH97736.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_063_000G1_scaffold_1007_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25774..26226)
DNA (453bp) protein (151aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Peptide deformylase 2 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HE07_9CLOT
peptide deformylase
L3_063_000G1_scaffold_1007_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26227..26463)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3K1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97738.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
DNA-binding protein
L3_063_000G1_scaffold_1007_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26814..27134
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1Q6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50462.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Displaying items 1-30 of 46 in total

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