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L3_063_000G1_scaffold_1566

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_1566_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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435..3071
DNA (2637bp) protein (879aa)
LPXTG-motif cell wall anchor domain-containing protein (EC:3.2.1.89)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2G0_9CLOT
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EEH96771.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_063_000G1_scaffold_1566_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3120..3227
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96756.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_063_000G1_scaffold_1566_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3320..4513)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1U9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96772.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ROK family transcriptional regulator
L3_063_000G1_scaffold_1566_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5227..6579
DNA (1353bp) protein (451aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6K2_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
celC; PTS system cellobiose-specific transporter subunit IIC CelC
L3_063_000G1_scaffold_1566_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6580..8361
DNA (1782bp) protein (594aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
glycosyl hydrolase family protein (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HET5_9CLOT
L3_063_000G1_scaffold_1566_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8478..9797
DNA (1320bp) protein (440aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCE7_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
celB; PTS system cellobiose-specific transporter subunit IIC
L3_063_000G1_scaffold_1566_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9934..10833
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96776.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PEP phosphonomutase
L3_063_000G1_scaffold_1566_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10959..11276
DNA (318bp) protein (106aa)
PTS system, lactose/cellobiose family IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1V0_9CLOT
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:EEH96777.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PTS system transporter subunit IIB
L3_063_000G1_scaffold_1566_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11373..11681
DNA (309bp) protein (103aa)
PTS system, lactose-specific IIa component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6K3_9CLOT
PTS system, lactose-specific IIa component {ECO:0000313|EMBL:EEH96778.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PTS system transporter subunit IIA
L3_063_000G1_scaffold_1566_10
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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11736..13850
DNA (2115bp) protein (705aa)
Glycosyl hydrolase family protein n=1 Tax=Streptococcus equi subsp. zooepidemicus S31A1 RepID=T0JG48_STRSZ
nanA; sialidase NanA-like
Sialidase NanA-like {ECO:0000313|EMBL:ACG62759.1}; TaxID=552526 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. zooepidemicus (strain MGCS10565).;"
L3_063_000G1_scaffold_1566_11
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14079..19010
DNA (4932bp) protein (1644aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06446.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
glycosyl hydrolase family protein
L3_063_000G1_scaffold_1566_12
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19010..20851
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AHC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47453.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
sialidase
L3_063_000G1_scaffold_1566_13
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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21300..23276
DNA (1977bp) protein (659aa)
Uncharacterized protein n=2 Tax=Anaerostipes RepID=R6QGX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC35883.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
hypothetical protein
L3_063_000G1_scaffold_1566_14
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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23681..26026
DNA (2346bp) protein (782aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=28896 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium saccharolyticum.;"
XynA n=1 Tax=Thermoanaerobacterium saccharolyticum RepID=D2X5N2_THESA
glycoside hydrolase family protein
L3_063_000G1_scaffold_1566_15
Bacillus sp. TS-2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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26090..26737
DNA (648bp) protein (216aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1450694 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. TS-2.;"
Xyn10A n=1 Tax=Caldanaerobius polysaccharolyticus RepID=J7JXS8_9THEO
glycoside hydrolase family protein
L3_063_000G1_scaffold_1566_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27047..28198
DNA (1152bp) protein (384aa)
Cysteine desulfurase NifS n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HET6_9CLOT
Cysteine desulfurase NifS {ECO:0000313|EMBL:EEH96780.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cysteine desulfurase NifS
L3_063_000G1_scaffold_1566_17
unknown

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comp(28249..28395)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 17 items

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