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L3_063_000G1_scaffold_2468

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_2468_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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517..1506
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4M3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99495.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative lipoprotein
L3_063_000G1_scaffold_2468_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1542..2918)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine-D-glutamate ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H570_9CLOT
L3_063_000G1_scaffold_2468_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3501..4892)
DNA (1392bp) protein (464aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Glycyl-tRNA synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH14_9CLOT
glycyl-tRNA synthetase
L3_063_000G1_scaffold_2468_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5780..7285)
DNA (1506bp) protein (502aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysyl-tRNA synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIH2_9CLOT
L3_063_000G1_scaffold_2468_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7300..7875)
DNA (576bp) protein (192aa)
Transcription elongation factor greA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8Y8_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
greA1; transcription elongation factor GreA
L3_063_000G1_scaffold_2468_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7997..8983)
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dus; tRNA-dihydrouridine synthase 1 (EC:1.-.-.-)
NifR3 family putative TIM-barrel protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4M1_9CLOT
L3_063_000G1_scaffold_2468_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8990..9769)
DNA (780bp) protein (260aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H569_9CLOT
L3_063_000G1_scaffold_2468_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9901..11571)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
fhs; formate--tetrahydrofolate ligase Fhs (EC:6.3.4.3)
Formate-tetrahydrofolate ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH12_9CLOT
L3_063_000G1_scaffold_2468_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11896..13698)
DNA (1803bp) protein (601aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ATP-dependent metallopeptidase HflB n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIG9_9CLOT
hflB; ATP-dependent metallopeptidase HflB family protein
L3_063_000G1_scaffold_2468_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13744..14283)
DNA (540bp) protein (180aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8Y7_9CLOT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EEH99486.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_063_000G1_scaffold_2468_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14288..15682)
DNA (1395bp) protein (465aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
tRNA(Ile)-lysidine synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4L9_9CLOT
tilS; tRNA(Ile)-lysidine synthetase
L3_063_000G1_scaffold_2468_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16013..18418)
DNA (2406bp) protein (802aa)
spoIIE; stage II sporulation protein E (EC:3.1.3.16)
Stage II sporulation protein E n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H568_9CLOT
Stage II sporulation protein E {ECO:0000313|EMBL:EEH99484.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Displaying 12 items

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