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L3_063_000G1_scaffold_3879

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_3879_1
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(97..825)
DNA (729bp) protein (243aa)
GntR domain protein n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q7Y9_CALH1
GntR domain-containing protein
GntR domain protein {ECO:0000313|EMBL:ADQ07907.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 /; 108).;"
L3_063_000G1_scaffold_3879_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1022..1360
DNA (339bp) protein (113aa)
SAF protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XIJ4_9CLOT
SAF protein {ECO:0000313|EMBL:ENZ15151.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_063_000G1_scaffold_3879_3
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1374..1817
DNA (444bp) protein (148aa)
D-galactarate dehydratase/altronate hydrolase domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N591_9CLOT
D-galactarate dehydratase/altronate hydrolase domain protein {ECO:0000313|EMBL:CDC06205.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
D-galactarate dehydratase
L3_063_000G1_scaffold_3879_4
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1799..2584
DNA (786bp) protein (262aa)
D-galactarate dehydratase/altronate hydrolase domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N591_9CLOT
D-galactarate dehydratase/altronate hydrolase domain protein {ECO:0000313|EMBL:CDC06205.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
D-galactarate dehydratase
L3_063_000G1_scaffold_3879_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2585..3871)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 PF86_9FIRM">RepID=B0PF86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10019.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_063_000G1_scaffold_3879_6
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(3868..4974)
DNA (1107bp) protein (369aa)
mdh; Malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000313|EMBL:CCP26766.1}; EC=1.1.1.37 {ECO:0000313|EMBL:CCP26766.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
Malate dehydrogenase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LXL0_TEPAE
L3_063_000G1_scaffold_3879_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4993..5712)
DNA (720bp) protein (240aa)
High-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENF1_9FIRM
High-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF {ECO:0000313|EMBL:EEQ59681.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
livF; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily
L3_063_000G1_scaffold_3879_8
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5715..6491)
DNA (777bp) protein (259aa)
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LXL2_TEPAE
livG; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCP26768.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L3_063_000G1_scaffold_3879_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6469..7494)
DNA (1026bp) protein (342aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN83_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ59679.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter permease
L3_063_000G1_scaffold_3879_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7507..8379)
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN82_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ59678.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC-type transporter, integral membrane subunit
L3_063_000G1_scaffold_3879_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8514..9653)
DNA (1140bp) protein (380aa)
Receptor family ligand-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN81_9FIRM
Receptor family ligand-binding protein {ECO:0000313|EMBL:EEQ59677.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter substrate-binding protein
L3_063_000G1_scaffold_3879_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9776..10720)
DNA (945bp) protein (315aa)
Dihydrodipicolinate synthetase family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN80_9FIRM
Dihydrodipicolinate synthetase family {ECO:0000313|EMBL:EEQ59676.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
dihydrodipicolinate synthetase
L3_063_000G1_scaffold_3879_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10805..11476)
DNA (672bp) protein (224aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8S3J4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13005.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
GntR family transcriptional regulator
Displaying 13 items

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