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L3_063_000G1_scaffold_664

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_664_1
unknown

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2..124
DNA (123bp) protein (41aa)

This feature has no annotations

L3_063_000G1_scaffold_664_2
unknown

Not on your lists

comp(334..1575)
DNA (1242bp) protein (414aa)

This feature has no annotations

L3_063_000G1_scaffold_664_3
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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1988..2590
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30203.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
cell envelope integrity inner membrane protein TolA
L3_063_000G1_scaffold_664_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2657..3802)
DNA (1146bp) protein (382aa)
Predicted oxidoreductases of the aldo/keto reductase family n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSR2_9FIRM
Predicted oxidoreductases of the aldo/keto reductase family {ECO:0000313|EMBL:CCY32813.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted oxidoreductases of the aldo/keto reductase family
L3_063_000G1_scaffold_664_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3915..4877)
DNA (963bp) protein (321aa)
NlpC/P60 family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXL2_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EHM37251.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
NLP/P60 protein
L3_063_000G1_scaffold_664_6
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(4908..5198)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EIC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91019.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_063_000G1_scaffold_664_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(5416..5661)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LMX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87225.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_063_000G1_scaffold_664_8
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists


comp(5758..8145)
DNA (2388bp) protein (796aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
pheT; Phenylalanine-tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HZH1_9FIRM
L3_063_000G1_scaffold_664_9
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists


comp(8158..9201)
DNA (1044bp) protein (348aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ER09_9FIRM
L3_063_000G1_scaffold_664_10
unknown

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9226..9456
DNA (231bp) protein (77aa)

This feature has no annotations

L3_063_000G1_scaffold_664_11
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

9615..10484
DNA (870bp) protein (290aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H9G5_9FIRM
carbohydrate kinase
L3_063_000G1_scaffold_664_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

10491..11060
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GYK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30513.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_063_000G1_scaffold_664_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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11076..12251
DNA (1176bp) protein (392aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
alr; Alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IE36_9FIRM
L3_063_000G1_scaffold_664_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12535..15432
DNA (2898bp) protein (966aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54373.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cell wall/surface repeat protein
L3_063_000G1_scaffold_664_15
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15566..22987
DNA (7422bp) protein (2474aa)
FMN-binding protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36E82
FMN-binding domain protein {ECO:0000313|EMBL:EGC02463.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
FMN-binding domain-containing protein
L3_063_000G1_scaffold_664_16
unknown

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23239..23715
DNA (477bp) protein (159aa)

This feature has no annotations

L3_063_000G1_scaffold_664_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

24151..26514
DNA (2364bp) protein (788aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B5FBE0
Uncharacterized protein {ECO:0000313|EMBL:CCX73937.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
CRISPR-associated helicase Cas3
L3_063_000G1_scaffold_664_18
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26520..27254
DNA (735bp) protein (245aa)
CRISPR-associated protein Cas5 n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B34B42
CRISPR-associated protein cas5, subtype I-c/dvulg {ECO:0000313|EMBL:EOS63279.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
CRISPR-associated protein, Csd5d family
L3_063_000G1_scaffold_664_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27254..29041
DNA (1788bp) protein (596aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B547CB
CRISPR-associated protein cas8c/csd1, subtype I-c/dvulg {ECO:0000313|EMBL:EOS63280.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
CRISPR-associated protein, Csd1 family
L3_063_000G1_scaffold_664_20
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29045..29890
DNA (846bp) protein (282aa)
CRISPR-associated protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B53031
Uncharacterized protein {ECO:0000313|EMBL:EEG30524.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG
L3_063_000G1_scaffold_664_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29880..30542
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26701.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
CRISPR-associated protein Cas4
L3_063_000G1_scaffold_664_22
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30539..31570
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDD6_9CLOT
CRISPR-associated protein Cas1
L3_063_000G1_scaffold_664_23
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31575..31865
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LWV8_9FIRM
CRISPR-associated Cas2 family protein
L3_063_000G1_scaffold_664_24
Selenomonas sp. oral taxon 137, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(32290..33078)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Selenomonas sp. oral taxon 137 str. F0430 RepID=E4LJW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR40816.1}; TaxID=879310 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. oral taxon 137 str. F0430.;"
L3_063_000G1_scaffold_664_25
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(33899..35647)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88057.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_063_000G1_scaffold_664_26
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(35740..35943)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M0X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88056.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_063_000G1_scaffold_664_27
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(36014..36157)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MLD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86632.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_063_000G1_scaffold_664_28
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(36154..36444)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J139_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42741.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_063_000G1_scaffold_664_29

Not on your lists

36636..36914
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RPA2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC43460.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein predicted by Glimmer/Critica
L3_063_000G1_scaffold_664_30
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

36942..37742
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75270.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
sig17; RNA polymerase sigma factor
Displaying items 1-30 of 45 in total

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