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L3_063_000G1_scaffold_1114

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_1114_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..363
DNA (363bp) protein (121aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDR47879.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDR47879.1};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Cell wall-binding repeat protein (Fragment) n=1 Tax=Actinomyces johnsonii F0510 RepID=U1QEZ9_9ACTO
lipoprotein
L3_063_000G1_scaffold_1114_2
Adlercreutzia equolifaciens, Adlercreutzia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

873..3203
DNA (2331bp) protein (777aa)
surface protein PspA, partial n=1 Tax=Streptococcus pneumoniae RepID=UPI0001DD01F6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN76666.1}; TaxID=1384484 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia.;" source="Adlercreutzia equolifaciens DSM 19450.;"
L3_063_000G1_scaffold_1114_3
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3528..3962)
DNA (435bp) protein (145aa)
polysaccharide biosynthesis protein GtrA n=1 Tax=Desulfitobacterium hafniense RepID=UPI00037C6F7D
GtrA-like protein {ECO:0000313|EMBL:CDX01445.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
hypothetical protein
L3_063_000G1_scaffold_1114_4
Cryptobacterium curtum, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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4286..5101
DNA (816bp) protein (272aa)
Glycosyl transferase n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MKT7_CRYCD
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:ACU94884.1}; TaxID=469378 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium.;" source="Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3).;"
L3_063_000G1_scaffold_1114_5
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5203..6726
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJR3_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA47464.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_063_000G1_scaffold_1114_6
Cryptobacterium curtum, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7024..7449
DNA (426bp) protein (142aa)
Molybdenum-pterin binding domain protein n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MLY1_CRYCD
molybdenum-pterin binding domain protein
Molybdenum-pterin binding domain protein {ECO:0000313|EMBL:ACU93921.1}; TaxID=469378 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium.;" source="Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3).;"
L3_063_000G1_scaffold_1114_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7710..8699
DNA (990bp) protein (330aa)
DNA binding , excisionase family domain protein n=1 Tax=Clostridium difficile F501 RepID=T4C3B3_CLODI
DNA binding , excisionase family domain protein {ECO:0000313|EMBL:EQI14693.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
DNA-binding protein, excisionase family
L3_063_000G1_scaffold_1114_8
Slackia exigua, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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9123..9980
DNA (858bp) protein (286aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIE9_9ACTN
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EEZ60816.1}; TaxID=649764 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia exigua ATCC 700122.;"
alpha/beta hydrolase fold protein
L3_063_000G1_scaffold_1114_9
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10086..11468)
DNA (1383bp) protein (461aa)
NAD-dependent aldehyde dehydrogenases (EC:1.2.1.3 1.2.1.5)
Aldehyde dehydrogenase n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BQG7_9ACTN
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
L3_063_000G1_scaffold_1114_10
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11468..12676)
DNA (1209bp) protein (403aa)
Alcohol dehydrogenase, class IV (EC:1.1.1.1)
Uncharacterized protein n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3K2K8_TREMA
Uncharacterized protein {ECO:0000313|EMBL:EPF31730.1}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
L3_063_000G1_scaffold_1114_11
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12682..13149)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BRD8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD68057.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
hypothetical protein
L3_063_000G1_scaffold_1114_12
unknown

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13598..14692
DNA (1095bp) protein (365aa)

This feature has no annotations

L3_063_000G1_scaffold_1114_13
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15007..16575
DNA (1569bp) protein (523aa)
Amino acid carrier protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6I7X3_9ACTN
Amino acid carrier protein {ECO:0000313|EMBL:CDB34142.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
amino acid carrier protein
L3_063_000G1_scaffold_1114_14
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17039..18613)
DNA (1575bp) protein (525aa)
Solute:sodium symporter (SSS) family transporter n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YKE3_9ACTN
Solute:sodium symporter (SSS) family transporter {ECO:0000313|EMBL:EJZ83718.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
SSS sodium solute transporter superfamily
L3_063_000G1_scaffold_1114_15
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19331..21112
DNA (1782bp) protein (594aa)
FAD binding domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBL6_9ACTN
FAD binding domain protein {ECO:0000313|EMBL:EEA90312.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L3_063_000G1_scaffold_1114_16
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21496..22551
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YJT8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ83706.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
hypothetical protein
L3_063_000G1_scaffold_1114_17
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22849..23370
DNA (522bp) protein (174aa)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FMP8_9ACTN
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CCY06128.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L3_063_000G1_scaffold_1114_18
Cryptobacterium curtum, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23731..24441
DNA (711bp) protein (237aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MP98_CRYCD
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:ACU94738.1}; TaxID=469378 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium.;" source="Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3).;"
L3_063_000G1_scaffold_1114_19
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24702..25514
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HIV3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDB33251.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
est1D; carbohydrate esterase 1 Est1D
L3_063_000G1_scaffold_1114_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25744..26154
DNA (411bp) protein (137aa)
Peptide deformylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E830_9ACTN
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
N-formylmethionyl-tRNA deformylase
L3_063_000G1_scaffold_1114_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26298..28052
DNA (1755bp) protein (585aa)
D-lactate dehydrogenase (EC:1.1.2.4)
FAD linked oxidase C-terminal domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBC5_9ACTN
FAD linked oxidase C-terminal domain protein {ECO:0000313|EMBL:CDA36155.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_063_000G1_scaffold_1114_22
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28129..29097)
DNA (969bp) protein (323aa)
Putative dehydrogenase n=1 Tax=Eggerthella sp. CAG:209 RepID=R6H7P0_9ACTN
Putative dehydrogenase {ECO:0000313|EMBL:CDB32835.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
putative dehydrogenase
L3_063_000G1_scaffold_1114_23
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29469..30278
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D5K7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85078.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
L3_063_000G1_scaffold_1114_24
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30297..31751)
DNA (1455bp) protein (485aa)
Conserved domain protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6I5A7_9ACTN
Conserved domain protein {ECO:0000313|EMBL:CDB33247.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
type IV secretory pathway, VirD4 component
L3_063_000G1_scaffold_1114_25
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31982..32668)
DNA (687bp) protein (229aa)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eggerthella sp. CAG:209 RepID=R6H698_9ACTN
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|RuleBase:RU003567}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
protease subunit of ATP-dependent protease
L3_063_000G1_scaffold_1114_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33094..34707
DNA (1614bp) protein (538aa)
Peptide chain release factor 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E874_9ACTN
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
bacterial peptide chain release factor 3 (bRF-3)
L3_063_000G1_scaffold_1114_27
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35385..37103
DNA (1719bp) protein (573aa)
Sulfate permease and related transporters (MFS superfamily) n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HIU4_9ACTN
Sulfate permease and related transporters (MFS superfamily) {ECO:0000313|EMBL:CDB33241.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
Sulfate permease and related transporters (MFS superfamily)
L3_063_000G1_scaffold_1114_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37331..38155
DNA (825bp) protein (275aa)
TipAS antibiotic-recognition domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA10_9ACTN
TipAS antibiotic-recognition domain protein {ECO:0000313|EMBL:CDA36503.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator
L3_063_000G1_scaffold_1114_29
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38301..38969
DNA (669bp) protein (223aa)
Rubrerythrin n=1 Tax=Collinsella sp. CAG:289 RepID=R7D3Z0_9ACTN
Rubrerythrin {ECO:0000313|EMBL:CDD84498.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
Rubrerythrin
L3_063_000G1_scaffold_1114_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(39190..39366)
DNA (177bp) protein (59aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9X1_9ACTN
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDA36488.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Displaying 30 items

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