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L3_063_000G1_scaffold_2230

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_2230_1
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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225..1712
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HK80_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDB34454.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
efflux pump protein
L3_063_000G1_scaffold_2230_2
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1843..3006)
DNA (1164bp) protein (388aa)
Transporter, major facilitator family protein n=1 Tax=Slackia sp. CM382 RepID=J5Y9U1_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EJU35187.1}; TaxID=1111137 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia sp. CM382.;"
major facilitator superfamily protein
L3_063_000G1_scaffold_2230_3
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3061..3690)
DNA (630bp) protein (210aa)
Radical SAM superfamily n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HMJ1_9ACTN
Radical SAM superfamily {ECO:0000313|EMBL:CDB34456.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
Radical SAM superfamily.
L3_063_000G1_scaffold_2230_4
unknown

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3711..4004
DNA (294bp) protein (98aa)

This feature has no annotations

L3_063_000G1_scaffold_2230_5
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3888..4733)
DNA (846bp) protein (282aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal/pyridoxine/pyridoxamine kinase n=1 Tax=Eggerthella sp. CAG:209 RepID=R6I8U6_9ACTN
L3_063_000G1_scaffold_2230_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4893..5195
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC86_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43598.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_063_000G1_scaffold_2230_7
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5265..5942)
DNA (678bp) protein (226aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
Ribosomal RNA small subunit methyltransferase J n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WLB2_9ACTN
hypothetical protein
L3_063_000G1_scaffold_2230_8
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6378..8339
DNA (1962bp) protein (654aa)
Fructose-bisphosphatase {ECO:0000256|SAAS:SAAS00065010}; EC=3.1.3.11 {ECO:0000256|SAAS:SAAS00065010};; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UU86_EEGSY
hypothetical protein
L3_063_000G1_scaffold_2230_9
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8466..9179)
DNA (714bp) protein (238aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
Methylthioadenosine nucleosidase n=1 Tax=Eggerthella sp. CAG:209 RepID=R6H9F3_9ACTN
L3_063_000G1_scaffold_2230_10
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9483..10532
DNA (1050bp) protein (350aa)
Phosphate transporter family protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HLZ0_9ACTN
Phosphate transporter family protein {ECO:0000313|EMBL:CDB34266.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
phosphate transporter protein
L3_063_000G1_scaffold_2230_11
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10889..13258
DNA (2370bp) protein (790aa)
Pyruvate-formate lyase n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N778_SLAHD
Pyruvate-formate lyase {ECO:0000313|EMBL:ACV22763.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
pyruvate-formate lyase
L3_063_000G1_scaffold_2230_12
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13274..14236
DNA (963bp) protein (321aa)
Glycyl-radical enzyme activator family protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N779_SLAHD
glycyl-radical enzyme activator family protein
Glycyl-radical enzyme activator family protein {ECO:0000313|EMBL:ACV22764.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_063_000G1_scaffold_2230_13
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14286..15698
DNA (1413bp) protein (471aa)
Na+/H+ antiporter n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N780_SLAHD
Na+/H+ antiporter
Na+/H+ antiporter {ECO:0000313|EMBL:ACV22765.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_063_000G1_scaffold_2230_14
Slackia exigua, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15917..16678
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WI15_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEZ60683.1}; TaxID=649764 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia exigua ATCC 700122.;"
hypothetical protein
L3_063_000G1_scaffold_2230_15
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16789..17631
DNA (843bp) protein (281aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
ung; uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HGV3_9ACTN
L3_063_000G1_scaffold_2230_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17874..19169
DNA (1296bp) protein (432aa)
Chloride transporter, ClC family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E879_9ACTN
Chloride transporter, ClC family {ECO:0000313|EMBL:EBA40095.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Chloride channel protein EriC
L3_063_000G1_scaffold_2230_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19332..20933
DNA (1602bp) protein (534aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8I2_9ACTN
GMP synthase
Displaying 17 items

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