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L3_063_000G1_scaffold_2991

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_000G1_scaffold_2991_1
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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255..725
DNA (471bp) protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Slackia piriformis YIT 12062 RepID=K0ZAV8_9ACTN
hypothetical protein
L3_063_000G1_scaffold_2991_2
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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924..1430
DNA (507bp) protein (169aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
MJ0936 family phosphodiesterase n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YLU0_9ACTN
phosphoesterase, MJ0936 family
L3_063_000G1_scaffold_2991_3
unknown

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comp(1858..2286)
DNA (429bp) protein (143aa)

This feature has no annotations

L3_063_000G1_scaffold_2991_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2473..4560)
DNA (2088bp) protein (696aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EBA40234.1}; EC=3.6.3.- {ECO:0000313|EMBL:EBA40234.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Heavy metal translocating P-type ATPase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L7_9ACTN
heavy metal translocating P-type ATPase
L3_063_000G1_scaffold_2991_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(4579..4836)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7M1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35688.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_063_000G1_scaffold_2991_6
Slackia sp. CM382, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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4984..5379
DNA (396bp) protein (132aa)
Heavy metal-associated domain protein n=2 Tax=Slackia RepID=D0WJ49_9ACTN
Heavy metal-associated domain protein {ECO:0000313|EMBL:EJU33411.1}; TaxID=1111137 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia sp. CM382.;"
copper chaperone
L3_063_000G1_scaffold_2991_7
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5616..6560)
DNA (945bp) protein (315aa)
GDSL-like Lipase/Acylhydrolase n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XAJ9_9ACTN
G-D-S-L family lipolytic protein
Uncharacterized protein {ECO:0000313|EMBL:KGI71585.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L3_063_000G1_scaffold_2991_8
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(6699..8123)
DNA (1425bp) protein (475aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
M18 family aminopeptidase n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YY36_9ACTN
aspartyl aminopeptidase
L3_063_000G1_scaffold_2991_9
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8322..9317
DNA (996bp) protein (332aa)
Transcriptional regulator protein-like protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W9B2_ATOPD
WYL domain protein {ECO:0000313|EMBL:EWC94377.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
transcriptional regulator protein-like protein
L3_063_000G1_scaffold_2991_10
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9754..11271
DNA (1518bp) protein (506aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Slackia piriformis YIT 12062 RepID=K0ZAW6_9ACTN
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EJZ84545.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
inosine 5-monophosphate dehydrogenase
L3_063_000G1_scaffold_2991_11
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11658..12659
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YM75_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EJZ84546.1}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
hypothetical protein
L3_063_000G1_scaffold_2991_12
Slackia exigua, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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12964..15534
DNA (2571bp) protein (857aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=649764 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia exigua ATCC 700122.;"
Leucine--tRNA ligase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WG84_9ACTN
leucyl-tRNA synthetase
Displaying 12 items

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