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L3_063_009G1_scaffold_141

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Displaying items 1-30 of 114 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_009G1_scaffold_141_1
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174..1955)
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003805669
hypothetical protein
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG21831.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
L3_063_009G1_scaffold_141_2
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2018..2914)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030F00F2
LysR substrate binding domain protein {ECO:0000313|EMBL:EFH12022.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
LysR family transcriptional regulator
L3_063_009G1_scaffold_141_3
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2949..4211)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030B2610
RmuC domain protein {ECO:0000313|EMBL:EHL95751.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
conserved exported protein of unknown function
L3_063_009G1_scaffold_141_4
unknown

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4483..4695
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031F4B2C
L3_063_009G1_scaffold_141_5
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4875..6488
DNA (1614bp) protein (538aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DD468D
DdpA protein {ECO:0000313|EMBL:BAQ47791.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
twin-arginine translocation pathway signal
L3_063_009G1_scaffold_141_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6493..7470
DNA (978bp) protein (326aa)
ABC transporter permease n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F57ACA
Putative oligopeptide ABC transporter, permease protein AppB {ECO:0000313|EMBL:EHM01572.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
binding-protein dependent transport system inner membrane protein
L3_063_009G1_scaffold_141_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7479..8312
DNA (834bp) protein (278aa)
ABC transporter permease n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DBC5E5
Putative dipeptide ABC transporter, permease protein DppC {ECO:0000313|EMBL:EHM01573.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
ABC transporter permease
L3_063_009G1_scaffold_141_8
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8312..9952
DNA (1641bp) protein (547aa)
Putative phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:EFH09554.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EFH09554.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
ABC transporter (EC:3.6.3.-)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E0BC25
L3_063_009G1_scaffold_141_9
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9949..11424
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E74F5F
TrkA protein {ECO:0000313|EMBL:BAQ48674.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
FAD dependent oxidoreductase
L3_063_009G1_scaffold_141_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11510..11995
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F976A7
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
L3_063_009G1_scaffold_141_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12028..12942
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000319E61F
Sugar kinase, ribokinase {ECO:0000313|EMBL:EIM28977.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
sugar kinase
L3_063_009G1_scaffold_141_12
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13190..15172
DNA (1983bp) protein (661aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FB804D
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EHM00332.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
L3_063_009G1_scaffold_141_13
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15339..16244)
DNA (906bp) protein (302aa)
pirin n=1 Tax=Roseomonas sp. B5 RepID=UPI0003010CC5
Pirin-related protein {ECO:0000313|EMBL:EJL35047.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
pirin domain-containing protein
L3_063_009G1_scaffold_141_14
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16271..17170)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003030D31
Uncharacterized protein {ECO:0000313|EMBL:EWF70578.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
transcriptional regulator
L3_063_009G1_scaffold_141_15
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17271..18011
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003190789
Uncharacterized protein {ECO:0000313|EMBL:EHT14238.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
oxidoreductase
L3_063_009G1_scaffold_141_16
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18147..18620)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E49F4D
cupin
Cupin {ECO:0000313|EMBL:AKC68262.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
L3_063_009G1_scaffold_141_17
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18789..19967)
DNA (1179bp) protein (393aa)
aminotransferase class V n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E0334D
Aminotransferase class V {ECO:0000313|EMBL:KGT73974.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein
L3_063_009G1_scaffold_141_18
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20183..20527
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030D32D2
Nucleoid-associated protein HMPREF9946_02685 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Putative transcriptional regulatory protein
L3_063_009G1_scaffold_141_19
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20786..21385
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003127438
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
recombination protein RecR
L3_063_009G1_scaffold_141_20
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21761..23251)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZWT7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHM02588.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
L3_063_009G1_scaffold_141_21
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23301..24251)
DNA (951bp) protein (317aa)
hypothetical protein, partial n=1 Tax=Roseomonas sp. B5 RepID=UPI00037886D3
LysR family transcription regulator protein {ECO:0000313|EMBL:EOA06260.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
LysR family transcriptional regulator
L3_063_009G1_scaffold_141_22
unknown

Not on your lists

comp(24499..24603)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_063_009G1_scaffold_141_23
unknown

Not on your lists

comp(24636..25004)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002ECBA7B
L3_063_009G1_scaffold_141_24
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25596..27194)
DNA (1599bp) protein (533aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
phosphoenolpyruvate carboxykinase, partial n=1 Tax=Roseomonas sp. B5 RepID=UPI00035D8BF4
L3_063_009G1_scaffold_141_25
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27389..28114)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D9199A
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EFH11942.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Hypothetical protein
L3_063_009G1_scaffold_141_26
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28172..28873
DNA (702bp) protein (234aa)
transcriptional regulator n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DB340C
Transcriptional regulatory protein ChvI {ECO:0000313|EMBL:EHL98097.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative two-component response regulator
L3_063_009G1_scaffold_141_27
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28873..30630
DNA (1758bp) protein (586aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D2D0CC
integral membrane sensor signal transduction histidine kinase
L3_063_009G1_scaffold_141_28
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30827..31603)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E08F01
Polyhydroxyalkanoate synthase {ECO:0000313|EMBL:ERF86000.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
L3_063_009G1_scaffold_141_29
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31548..32606)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D697A7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66477.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
L3_063_009G1_scaffold_141_30
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32706..34238
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00035FDD6A
membrane protein
Membrane protein {ECO:0000313|EMBL:AGP42495.1}; TaxID=1348660 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica S13.;"
Displaying items 1-30 of 114 in total

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