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L3_063_040G1_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_29_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..865)
DNA (864bp) protein (288aa)
Putative pseudouridine transporter n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SLP6_CITFR
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
hypothetical protein
L3_063_040G1_scaffold_29_2
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(962..1897)
DNA (936bp) protein (312aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
Pseudouridine-5'-phosphate glycosidase n=4 Tax=Citrobacter RepID=J0VMT1_9ENTR
pseudouridine-5'-phosphate glycosidase
L3_063_040G1_scaffold_29_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1890..2825)
DNA (936bp) protein (312aa)
Pseudouridine kinase n=2 Tax=Citrobacter RepID=R8VBJ6_9ENTR
Pseudouridine kinase {ECO:0000313|EMBL:KKC63453.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
pseudouridine kinase
L3_063_040G1_scaffold_29_4
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3125..4813)
DNA (1689bp) protein (563aa)
PTS system, Fru family, IIB component domain protein {ECO:0000313|EMBL:EJI91531.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EJI91531.1};; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
PTS system, Fru family, IIB component domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1R0G0_9ENTR
PTS system fructose-specific transporter subunits IIBC
L3_063_040G1_scaffold_29_5
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4829..5767)
DNA (939bp) protein (313aa)
fruK; 1-phosphofructokinase (EC:2.7.1.56)
Phosphofructokinase n=1 Tax=Enterobacter cloacae S611 RepID=V5CT23_ENTCL
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
L3_063_040G1_scaffold_29_6
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5767..6897)
DNA (1131bp) protein (377aa)
Phosphocarrier, HPr family protein n=1 Tax=Enterobacter cloacae S611 RepID=V5ACN4_ENTCL
Phosphocarrier, HPr family protein {ECO:0000313|EMBL:ESS58425.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein
L3_063_040G1_scaffold_29_7
Enterobacter sp. 35669, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7282..7656
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Enterobacter cloacae RepID=UPI000316BF12
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:KJN33288.1}; TaxID=1619244 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35669.;"
carboxyvinyl-carboxyphosphonate phosphorylmutase
L3_063_040G1_scaffold_29_8
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7840..8094)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=H3RES0_ERWST
Uncharacterized protein {ECO:0000313|EMBL:EHU00246.1}; TaxID=660596 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii subsp. stewartii DC283.;"
hypothetical protein
L3_063_040G1_scaffold_29_9
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8240..8812
DNA (573bp) protein (191aa)
Elongation factor P-like protein n=2 Tax=Enterobacteriaceae RepID=M9VW31_RAOOR
elongation factor P
Elongation factor P-like protein {ECO:0000256|HAMAP-Rule:MF_00646, ECO:0000256|SAAS:SAAS00055120}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
L3_063_040G1_scaffold_29_10
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8883..10073)
DNA (1191bp) protein (397aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IV94_9ENTR
L3_063_040G1_scaffold_29_11
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10277..11743
DNA (1467bp) protein (489aa)
D-mannonate oxidoreductase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VMS9_9ENTR
D-mannonate oxidoreductase
D-mannonate oxidoreductase {ECO:0000313|EMBL:AGN84893.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_29_12
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11859..12836
DNA (978bp) protein (326aa)
CobW/HypB/UreG, nucleotide-binding domain protein n=1 Tax=Enterobacter cloacae S611 RepID=V5AXK3_ENTCL
CobW/HypB/UreG, nucleotide-binding domain protein {ECO:0000313|EMBL:ESS58397.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
hypothetical protein
L3_063_040G1_scaffold_29_13
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12879..13571
DNA (693bp) protein (231aa)
Inner membrane protein yeiU n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QI11_9ENTR
Membrane protein {ECO:0000313|EMBL:KDE34713.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
membrane protein
L3_063_040G1_scaffold_29_14
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14006..14569
DNA (564bp) protein (188aa)
Lipoprotein spr n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1R017_9ENTR
Lipoprotein spr {ECO:0000313|EMBL:EJI91381.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
spr; membrane protein
L3_063_040G1_scaffold_29_15
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14765..16321
DNA (1557bp) protein (519aa)
phage resistance protein n=1 Tax=Enterobacter cloacae RepID=UPI0002DD666F
phage resistance protein
Phage resistance protein {ECO:0000313|EMBL:AHJ77340.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_29_16
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16417..18225
DNA (1809bp) protein (603aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Enterobacter cloacae RepID=UPI0002FCBCD3
Antibiotic ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHJ77339.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
antibiotic ABC transporter substrate-binding protein
L3_063_040G1_scaffold_29_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18235..19335
DNA (1101bp) protein (367aa)
microcin C ABC transporter permease YejB n=1 Tax=Enterobacter cloacae RepID=UPI0002E0E822
Microcin ABC transporter permease {ECO:0000313|EMBL:KEY45070.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
microcin ABC transporter permease
L3_063_040G1_scaffold_29_18
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19335..20360
DNA (1026bp) protein (342aa)
microcin C ABC transporter permease n=1 Tax=Enterobacter cloacae RepID=UPI00030502A7
hypothetical protein
ABC transporter permease {ECO:0000313|EMBL:CDZ82562.1}; Microcin ABC transporter permease {ECO:0000313|EMBL:KGY19756.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
L3_063_040G1_scaffold_29_19
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20362..21951
DNA (1590bp) protein (530aa)
NikE protein {ECO:0000313|EMBL:KIS42994.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KIS42994.1};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
Nickel import ATP-binding protein NikE n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QZN6_9ENTR
microcin ABC transporter ATP-binding protein
L3_063_040G1_scaffold_29_20
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21955..22299)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QI42_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EJI91173.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
hypothetical protein
L3_063_040G1_scaffold_29_21
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22636..23829)
DNA (1194bp) protein (398aa)
Multidrug transporter n=1 Tax=Enterobacter sp. R4-368 RepID=R9VMT9_9ENTR
Bcr protein {ECO:0000313|EMBL:KIS43898.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
multidrug transporter
L3_063_040G1_scaffold_29_22
Enterobacter sp. 42324, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23846..24553)
DNA (708bp) protein (236aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1619249 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 42324.;"
Pseudouridine synthase n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6S7S8_ENTCL
16S rRNA pseudouridylate synthase A
L3_063_040G1_scaffold_29_23
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24699..26468
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae S611 RepID=V5ACU6_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:ESS58485.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
hypothetical protein
L3_063_040G1_scaffold_29_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26503..26880
DNA (378bp) protein (126aa)
LSU ribosomal protein L25P n=1 Tax=Shigella dysenteriae RepID=UPI000326549D
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01336, ECO:0000256|SAAS:SAAS00147491}; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
LSU ribosomal protein L25P
L3_063_040G1_scaffold_29_25
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27146..28150)
DNA (1005bp) protein (335aa)
Nucleoid-associated protein H650_06700 n=1 Tax=Enterobacter sp. R4-368 RepID=R9VJ79_9ENTR
nucleoid-associated protein NdpA
Nucleoid-associated protein H650_06700 {ECO:0000256|HAMAP-Rule:MF_00730}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_29_26
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28283..28510
DNA (228bp) protein (76aa)
UPF0352 protein Y71_4903 n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IW81_9ENTR
UPF0352 protein AW40_20210 {ECO:0000256|HAMAP-Rule:MF_00816}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L3_063_040G1_scaffold_29_27
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28529..30289
DNA (1761bp) protein (587aa)
membrane protein n=1 Tax=Enterobacter cloacae RepID=UPI00031F8EB5
Membrane protein {ECO:0000313|EMBL:AHJ77328.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
membrane protein
L3_063_040G1_scaffold_29_28
Brenneria sp. EniD312, Brenneria, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30769..31116
DNA (348bp) protein (116aa)
Sigma-S stabilization anti-adaptor protein n=1 Tax=Brenneria sp. EniD312 RepID=G7LTF2_9ENTR
Sigma-S stabilization anti-adaptor protein {ECO:0000313|EMBL:EHD20690.1}; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Brenneria.;" source="Brenneria sp. EniD312.;"
hypothetical protein
L3_063_040G1_scaffold_29_29
unknown

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comp(31138..31701)
DNA (564bp) protein (188aa)

This feature has no annotations

L3_063_040G1_scaffold_29_30
unknown

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comp(31698..32069)
DNA (372bp) protein (124aa)

This feature has no annotations

Displaying items 1-30 of 146 in total

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