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L3_063_040G1_scaffold_71

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_71_1
unknown

Not on your lists

1..72
DNA (72bp) protein (24aa)

This feature has no annotations

L3_063_040G1_scaffold_71_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98..481
DNA (384bp) protein (128aa)
CotJC protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q6Q3_9CLOT
CotJC protein {ECO:0000313|EMBL:EKY23282.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
manganese containing catalase family protein
L3_063_040G1_scaffold_71_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(522..902)
DNA (381bp) protein (127aa)
Putative endoribonuclease L-PSP n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3G6_9CLOT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEH98472.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
endoribonuclease L-PSP
L3_063_040G1_scaffold_71_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(922..2142)
DNA (1221bp) protein (407aa)
ilvA; L-threonine dehydratase biosynthetic IlvA (EC:4.3.1.19)
UPI0003D5CC56 related cluster n=1 Tax=unknown RepID=UPI0003D5CC56
Threonine dehydratase {ECO:0000313|EMBL:ETI90060.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L3_063_040G1_scaffold_71_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2299..3657)
DNA (1359bp) protein (453aa)
FAD binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q5K3_9CLOT
FAD binding domain protein {ECO:0000313|EMBL:EKY23274.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
berberine and berberine like family protein
L3_063_040G1_scaffold_71_6
unknown

Not on your lists

comp(3650..4159)
DNA (510bp) protein (170aa)

This feature has no annotations

L3_063_040G1_scaffold_71_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4194..4751)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V122_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08888.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_040G1_scaffold_71_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4876..5391
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000371F9D0
NAD(P)H nitroreductase {ECO:0000313|EMBL:KJU72605.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
nitroreductase family protein
L3_063_040G1_scaffold_71_9
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5410..7623)
DNA (2214bp) protein (738aa)
ATP-dependent Clp proteinase n=1 Tax=Clostridium sp. CAG:411 RepID=R7HZ09_9CLOT
ATP-dependent Clp proteinase {ECO:0000313|EMBL:CDE44934.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
L3_063_040G1_scaffold_71_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7635..7934)
DNA (300bp) protein (100aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EYX7_9CLOT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L3_063_040G1_scaffold_71_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8110..8997)
DNA (888bp) protein (296aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUL4_CLOBO
ROK family protein {ECO:0000313|EMBL:EES49834.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_063_040G1_scaffold_71_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9011..9946)
DNA (936bp) protein (312aa)
manA; mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:AIY81248.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AIY81248.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
mannose-6-phosphate isomerase n=1 Tax=Clostridium botulinum RepID=UPI000365B9BD
L3_063_040G1_scaffold_71_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9959..10858)
DNA (900bp) protein (300aa)
ROK family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJJ5_9CLOT
ROK family protein {ECO:0000313|EMBL:EKY28148.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transcriptional regulator/sugar kinase
L3_063_040G1_scaffold_71_14
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10876..11547)
DNA (672bp) protein (224aa)
G-D-S-L family lipolytic protein n=1 Tax=Clostridium intestinale URNW RepID=U2N923_9CLOT
G-D-S-L family lipolytic protein {ECO:0000313|EMBL:ERK32007.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
L3_063_040G1_scaffold_71_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11595..12983)
DNA (1389bp) protein (463aa)
aryl-phospho-beta-glucosidase (EC:3.2.1.86)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T9E6_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU72699.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_063_040G1_scaffold_71_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13015..14322)
DNA (1308bp) protein (436aa)
PTS system, cellobiose-specific IIC component n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJM7_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
oligo-alpha-mannoside phosphotransferase system enzyme iic
L3_063_040G1_scaffold_71_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14498..15208)
DNA (711bp) protein (237aa)
GntR family transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G4S6_CLOPA
GntR family transcriptional regulator {ECO:0000313|EMBL:KJU72697.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
GntR family transcriptional regulator
L3_063_040G1_scaffold_71_18
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15379..15939)
DNA (561bp) protein (187aa)
antibiotic resistance protein VanZ n=1 Tax=Desulfitobacterium hafniense RepID=UPI000378961A
VanZ-like protein {ECO:0000313|EMBL:CDX02950.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
VanZ family protein
L3_063_040G1_scaffold_71_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15941..17194)
DNA (1254bp) protein (418aa)
Stage V sporulation protein E n=2 Tax=Clostridium botulinum B RepID=U4PMT8_CLOBO
Cell cycle family protein {ECO:0000313|EMBL:AIY79472.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L3_063_040G1_scaffold_71_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17185..17604)
DNA (420bp) protein (140aa)
Lineage-specific thermal regulator protein n=2 Tax=Clostridium botulinum B RepID=B2TNP2_CLOBB
lineage-specific thermal regulator protein
Lineage-specific thermal regulator protein {ECO:0000313|EMBL:ACD21796.1}; Transcriptional regulator, PadR family {ECO:0000313|EMBL:CDH91567.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_063_040G1_scaffold_71_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17614..18135)
DNA (522bp) protein (174aa)
RNA polymerase sigma factor n=2 Tax=Clostridium botulinum B RepID=B2TNP3_CLOBB
RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:AIY80440.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_063_040G1_scaffold_71_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18269..19246
DNA (978bp) protein (326aa)
HD domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DUV0_CLOSO
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CEQ10065.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
ydhJ; metal-dependent phosphohydrolase
L3_063_040G1_scaffold_71_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19269..20180)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q5P5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY23221.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_063_040G1_scaffold_71_24
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20292..21638)
DNA (1347bp) protein (449aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X4S3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04762.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
L3_063_040G1_scaffold_71_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21792..22415)
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:KJU70897.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L3_063_040G1_scaffold_71_26
unknown

Not on your lists

comp(22405..22941)
DNA (537bp) protein (179aa)

This feature has no annotations

L3_063_040G1_scaffold_71_27
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23053..24318)
DNA (1266bp) protein (422aa)
codA; Cytosine deaminase (EC:3.5.4.1)
Cytosine deaminase n=1 Tax=Clostridium sp. CAG:265 RepID=R6LPV1_9CLOT
Cytosine deaminase {ECO:0000313|EMBL:CDB76147.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
L3_063_040G1_scaffold_71_28
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24331..25566)
DNA (1236bp) protein (412aa)
Cytosine permease n=2 Tax=environmental samples RepID=R6FS38_9CLOT
Cytosine permease {ECO:0000313|EMBL:CDB76148.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
codB; Cytosine permease
L3_063_040G1_scaffold_71_29
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25905..31850)
DNA (5946bp) protein (1982aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Beta-galactosidase (EC:3.2.1.23)
Sortase B cell surface sorting signal n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBP6_9FIRM
L3_063_040G1_scaffold_71_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32191..32604
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=B1Q6Y8_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83308.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 110 in total

View Taxonomy