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L3_063_040G1_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_104_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(420..1262)
DNA (843bp) protein (281aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927, ECO:0000313|EMBL:AGE94386.1}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Formyltetrahydrofolate deformylase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K116_CITAM
formyltetrahydrofolate deformylase
L3_063_040G1_scaffold_104_2
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1299..1769)
DNA (471bp) protein (157aa)
SEC-C domain-containing protein domain-containing protein n=2 Tax=Enterobacter cloacae complex RepID=V3QKU1_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIX54585.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_063_040G1_scaffold_104_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1881..2792
DNA (912bp) protein (304aa)
Nte family protein rssa n=6 Tax=Citrobacter RepID=J0LXN5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC12201.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_063_040G1_scaffold_104_4
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2886..3899
DNA (1014bp) protein (338aa)
Regulator of RpoS n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YR06_9ENTR
Regulator of RpoS {ECO:0000256|HAMAP-Rule:MF_00958}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
response regulator
L3_063_040G1_scaffold_104_5
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4097..5008
DNA (912bp) protein (304aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Enterobacter cloacae S611 RepID=V5B1J7_ENTCL
L3_063_040G1_scaffold_104_6
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5276..5689)
DNA (414bp) protein (138aa)
H-NS protein n=17 Tax=Enterobacter RepID=D5C728_ENTCC
transcriptional regulator
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_104_7
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6220..6855
DNA (636bp) protein (212aa)
thymidine kinase (EC:2.7.1.21)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
PREDICTED: thymidine kinase-like n=1 Tax=Ceratitis capitata RepID=UPI00032A35F2
L3_063_040G1_scaffold_104_8
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7381..10062)
DNA (2682bp) protein (894aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G578_ENTLS
iron-containing alcohol dehydrogenase
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=701347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter lignolyticus (strain SCF1).;"
L3_063_040G1_scaffold_104_9
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10536..11183
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AG43_CITK8
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
hypothetical protein
L3_063_040G1_scaffold_104_10
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11965..13596
DNA (1632bp) protein (544aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VII2_9ENTR
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGN83946.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
peptide ABC transporter substrate-binding protein
L3_063_040G1_scaffold_104_11
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13681..14601
DNA (921bp) protein (307aa)
Oligopeptide ABC transporter, permease protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TL72_CITRI
oppB; oligopeptide ABC transporter permease
Oligopeptide ABC transporter, permease protein {ECO:0000313|EMBL:CBG88521.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
L3_063_040G1_scaffold_104_12
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14616..15524
DNA (909bp) protein (303aa)
Oligopeptide ABC transporter, permease protein OppC n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZD92_9ENTR
Oligopeptide ABC transporter, permease protein OppC {ECO:0000313|EMBL:EFC56980.1}; TaxID=500639 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cancerogenus ATCC 35316.;"
oppC; oligopeptide transport system permease OppC
L3_063_040G1_scaffold_104_13
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15536..16549
DNA (1014bp) protein (338aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Enterobacter sp. MGH 34 RepID=V3M4K6_9ENTR
Oligopeptide transporter ATP-binding component {ECO:0000313|EMBL:KJW99627.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
peptide/nickel transport system ATP-binding component
L3_063_040G1_scaffold_104_14
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16546..17550
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AG48_CITK8
hypothetical protein
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDZ83251.1}; Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGY20289.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
L3_063_040G1_scaffold_104_15
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17588..17917)
DNA (330bp) protein (110aa)
UPF0263 protein H650_01770 n=1 Tax=Enterobacter sp. R4-368 RepID=R9VII4_9ENTR
dsDNA-mimic protein
UPF0263 protein H650_01770 {ECO:0000256|HAMAP-Rule:MF_00680}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_104_16
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17952..19412)
DNA (1461bp) protein (487aa)
Cardiolipin synthase A {ECO:0000256|HAMAP-Rule:MF_00190, ECO:0000256|SAAS:SAAS00194234}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_00190};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_00190, ECO:0000256|SAAS:SAAS00017006};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
Cardiolipin synthase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QG64_9ENTR
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
L3_063_040G1_scaffold_104_17
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19557..19730
DNA (174bp) protein (58aa)
Uncharacterized protein (Fragment) n=1 Tax=Salmonella enterica subsp. enterica serovar Urbana str. R8-2977 RepID=G5RUQ6_SALET
Uncharacterized protein {ECO:0000313|EMBL:GAL59872.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
L3_063_040G1_scaffold_104_18
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19730..20413
DNA (684bp) protein (228aa)
LysE type translocator family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QXD6_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43695.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
lysine transporter LysE
L3_063_040G1_scaffold_104_19
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20431..20769
DNA (339bp) protein (113aa)
Small Multidrug Resistance family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YQL3_9ENTR
Small Multidrug Resistance family protein {ECO:0000313|EMBL:EJI90470.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
multidrug transporter
L3_063_040G1_scaffold_104_20
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21238..21450
DNA (213bp) protein (71aa)
ISEhe3 orfB n=3 Tax=Salmonella enterica I RepID=V1GMK8_SALET
transposase IS401
Transposase {ECO:0000313|EMBL:ESL83064.1}; TaxID=1329856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae UCICRE 12.;"
L3_063_040G1_scaffold_104_21
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21624..21953
DNA (330bp) protein (110aa)
Lipoprotein n=5 Tax=Gammaproteobacteria RepID=A4IUS4_YERPE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:GAB53505.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_104_22
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22162..22605)
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Cronobacter sakazakii RepID=A7MN39_CROS8
Uncharacterized protein {ECO:0000313|EMBL:KDE34246.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L3_063_040G1_scaffold_104_23
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22995..23540)
DNA (546bp) protein (182aa)
EF hand domain protein n=1 Tax=Cronobacter dublinensis 582 RepID=K8AZT3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KDE34247.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
hypothetical protein
L3_063_040G1_scaffold_104_24
unknown

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24041..24145
DNA (105bp) protein (35aa)

This feature has no annotations

L3_063_040G1_scaffold_104_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24251..24547)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Escherichia coli O111:H8 str. CFSAN001632 RepID=M5IA71_ECOLX
YciL domain-containing protein
Protein yciI {ECO:0000313|EMBL:KDU30570.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L3_063_040G1_scaffold_104_26
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24767..25489
DNA (723bp) protein (241aa)
cell envelope protein TonB n=1 Tax=Enterobacter cloacae RepID=UPI000309B923
energy transducer TonB
Energy transducer TonB {ECO:0000313|EMBL:AHJ73737.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_104_27
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25518..25919)
DNA (402bp) protein (134aa)
Thioesterase superfamily protein n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WB75_ENT38
acyl-CoA thioester hydrolase
Thioesterase superfamily protein {ECO:0000313|EMBL:ABP60955.1}; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
L3_063_040G1_scaffold_104_28
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26046..26585)
DNA (540bp) protein (180aa)
Probable intracellular septation protein A n=2 Tax=Enterobacter aerogenes RepID=G0EC44_ENTAK
Intracellular septation protein IspA
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
L3_063_040G1_scaffold_104_29
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26627..27370)
DNA (744bp) protein (248aa)
UPF0259 membrane protein H650_01820 n=1 Tax=Enterobacter sp. R4-368 RepID=R9VIJ2_9ENTR
UPF0259 membrane protein LG58_1384 {ECO:0000256|HAMAP-Rule:MF_01067}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
membrane protein
L3_063_040G1_scaffold_104_30
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27404..27799)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Enterobacter cloacae RepID=UPI0003705215
Uncharacterized protein {ECO:0000313|EMBL:KDE37940.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
ferredoxin
Displaying items 1-30 of 89 in total

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