ggKbase home page

L3_063_040G1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_116_1
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193..2394)
DNA (2202bp) protein (734aa)
CadA protein {ECO:0000313|EMBL:KIS44701.1}; EC=3.6.3.3 {ECO:0000313|EMBL:KIS44701.1};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
zntA; zinc ABC transporter ATPase (EC:3.6.3.3 3.6.3.5)
zinc/cadmium/mercury/lead-transporting ATPase n=1 Tax=Enterobacter cloacae RepID=UPI00031D1B83
L3_063_040G1_scaffold_116_2
Enterobacter sp. DC4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2470..3096)
DNA (627bp) protein (209aa)
Membrane protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VRK0_9ENTR
membrane protein
Putative membrane protein YhhN {ECO:0000313|EMBL:EWG70807.1}; TaxID=1395580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. DC4.;"
L3_063_040G1_scaffold_116_3
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3222..3497)
DNA (276bp) protein (92aa)
Membrane protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VPE8_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS44499.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
membrane protein
L3_063_040G1_scaffold_116_4
Leclercia adecarboxylata, Leclercia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3481..4089)
DNA (609bp) protein (203aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=911008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leclercia.;" source="Leclercia adecarboxylata ATCC 23216 = NBRC 102595.;"
Methyltransferase n=1 Tax=Enterobacter cloacae str. Hanford RepID=S7T7Z0_ENTCL
rsmD; ribosomal RNA small subunit methyltransferase D
L3_063_040G1_scaffold_116_5
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4274..5644
DNA (1371bp) protein (457aa)
Signal recognition particle receptor FtsY n=1 Tax=Enterobacter sp. R4-368 RepID=R9VM59_9ENTR
cell division protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_116_6
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5647..6315
DNA (669bp) protein (223aa)
Cell division ATP-binding protein FtsE n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1R4M9_9ENTR
FtsE protein {ECO:0000313|EMBL:KIS44361.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
cell division protein FtsE
L3_063_040G1_scaffold_116_7
Leclercia adecarboxylata, Leclercia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6308..7366
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BI93_9ENTR
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=911008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leclercia.;" source="Leclercia adecarboxylata ATCC 23216 = NBRC 102595.;"
ftsX; cell division protein FtsX
L3_063_040G1_scaffold_116_8
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7634..8491
DNA (858bp) protein (286aa)
RNA polymerase sigma factor RpoH n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IZN8_9ENTR
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
RNA polymerase factor sigma-32
L3_063_040G1_scaffold_116_9
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8554..10074)
DNA (1521bp) protein (507aa)
Bacterial regulatory s, gntR family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2J0H5_9ENTR
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EJI92884.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
DeoR family transcriptional regulator
L3_063_040G1_scaffold_116_10
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10182..11447
DNA (1266bp) protein (422aa)
GabT protein {ECO:0000313|EMBL:KIS41783.1}; EC=2.6.1.19 {ECO:0000313|EMBL:KIS41783.1};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate transaminase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2J0D5_9ENTR
L3_063_040G1_scaffold_116_11
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11706..12803
DNA (1098bp) protein (366aa)
Amino acid ABC transporter substrate-binding protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VM56_9ENTR
amino acid ABC transporter substrate-binding protein
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGN86129.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_116_12
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13149..13541)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1R4C4_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS45521.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
hypothetical protein
L3_063_040G1_scaffold_116_13
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13969..15078
DNA (1110bp) protein (370aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Enterobacter cloacae RepID=UPI00035CB542
leucine ABC transporter substrate-binding protein
Leucine ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHJ76208.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_116_14
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15252..16178
DNA (927bp) protein (309aa)
High-affinity branched-chain amino acid transport system permease livH n=7 Tax=Klebsiella RepID=H3LE88_KLEOX
High-affinity branched-chain amino acid transport system permease livH {ECO:0000313|EMBL:EHS90499.1}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
branched-chain amino acid transporter permease subunit LivH
L3_063_040G1_scaffold_116_15
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16175..17452
DNA (1278bp) protein (426aa)
leucine/isoleucine/valine transporter permease subunit n=1 Tax=Enterobacter mori RepID=UPI000237D517
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN66854.1}; Flags: Precursor;; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
L3_063_040G1_scaffold_116_16
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17449..18216
DNA (768bp) protein (256aa)
ABC transporter family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YXB2_9ENTR
ABC transporter family protein {ECO:0000313|EMBL:EJI92980.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
livG; Branched-chain amino acid transport ATP-binding protein LivG
L3_063_040G1_scaffold_116_17
Klebsiella sp. OBRC7, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18218..18931
DNA (714bp) protein (238aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56) RepID=D5CEK6_ENTCC
branched-chain amino acid transport system ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJU23786.1}; TaxID=936565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. OBRC7.;"
L3_063_040G1_scaffold_116_18
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19195..20511
DNA (1317bp) protein (439aa)
sn-glycerol-3-phosphate-binding periplasmic protein ugpB n=1 Tax=Enterobacter cloacae EcWSU1 RepID=G8LJ31_ENTCL
Glycerol-3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDE34575.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
ugpB; sn-glycerol-3-phosphate-binding periplasmic protein ugpB
L3_063_040G1_scaffold_116_19
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20626..21513
DNA (888bp) protein (296aa)
Binding--dependent transport system inner membrane component family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1R3J7_9ENTR
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KDE34576.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
glycerol-3-phosphate transporter permease
L3_063_040G1_scaffold_116_20
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21510..22355
DNA (846bp) protein (282aa)
ABC-type glycerol-3-phosphate transporter membrane protein n=5 Tax=Cronobacter sakazakii RepID=I2EDP6_CROSK
ugpE; ABC-type glycerol-3-phosphate transporter membrane protein
SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3) {ECO:0000313|EMBL:CCK04244.1}; TaxID=1208663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 701.;"
L3_063_040G1_scaffold_116_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22357..23430
DNA (1074bp) protein (358aa)
Glycerol-3-phosphate ABC transporter ATP-binding protein n=2 Tax=Enterobacter RepID=R9VRU7_9ENTR
Glycerol-3-phosphate transporter ATP-binding subunit {ECO:0000313|EMBL:AKE60446.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
ugpC; glycerol-3-phosphate ABC transporter ATP-binding protein
L3_063_040G1_scaffold_116_22
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23427..24167
DNA (741bp) protein (247aa)
ugpQ; glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UP76_9ENTR
Glycerophosphoryl diester phosphodiesterase UgpQ {ECO:0000313|EMBL:GAL46268.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L3_063_040G1_scaffold_116_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24164..24616)
DNA (453bp) protein (151aa)
membrane protein n=1 Tax=Escherichia sp. TW09231 RepID=UPI0002BB3B1B
Uncharacterized protein {ECO:0000313|EMBL:KDV63203.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
hypothetical protein
L3_063_040G1_scaffold_116_24
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24741..26492
DNA (1752bp) protein (584aa)
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:AHJ76220.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AHJ76220.1};; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
ggt; gamma-glutamyltranspeptidase (EC:2.3.2.2)
gamma-glutamyltranspeptidase n=1 Tax=Enterobacter cloacae RepID=UPI0003057957
L3_063_040G1_scaffold_116_25
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26559..27050)
DNA (492bp) protein (164aa)
YhhY n=2 Tax=Enterobacter cloacae RepID=G8LJ24_ENTCL
Acetyltransferase {ECO:0000313|EMBL:KJX33186.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
yhhY; protein YhhY
L3_063_040G1_scaffold_116_26
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27265..27906)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Klebsiella sp. 4_1_44FAA RepID=G9RFL8_9ENTR
Ccm domain-containing protein {ECO:0000313|EMBL:ERE43156.1}; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK12.;"
hypothetical protein
L3_063_040G1_scaffold_116_27
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28205..29242
DNA (1038bp) protein (346aa)
Dehydrogenase n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3HNI2_ENTCL
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AHW96060.1}; TaxID=1421338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae L1.;"
L3_063_040G1_scaffold_116_28
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29366..30061
DNA (696bp) protein (232aa)
Quercetin 2,3-dioxygenase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VM45_9ENTR
qercetin 2,3-dioxygenase
Quercetin 2,3-dioxygenase {ECO:0000313|EMBL:AGN86114.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_116_29
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30164..31159
DNA (996bp) protein (332aa)
Transcriptional regulator, LacI family n=12 Tax=Enterobacter cloacae complex RepID=D6DWG5_ENTCL
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KJN18950.1}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
L3_063_040G1_scaffold_116_30
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31296..31817
DNA (522bp) protein (174aa)
Carbohydrate kinase, thermoresistant glucokinase family n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S3F0_ENTAL
Thermoresistant gluconokinase {ECO:0000313|EMBL:CDZ86269.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
thermoresistant glucokinase family carbohydrate kinase
Displaying items 1-30 of 71 in total

View Taxonomy