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L3_063_040G1_scaffold_150

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_150_1
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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320..1378
DNA (1059bp) protein (353aa)
Membrane-bound lytic murein transglycosylase A {ECO:0000256|PIRNR:PIRNR019422}; EC=4.2.2.n1 {ECO:0000256|PIRNR:PIRNR019422};; Murein hydrolase A {ECO:0000256|PIRNR:PIRNR019422}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Membrane-bound lytic murein transglycosylase A n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0D1_ESCHE
mltA; murein transglycosylase A
L3_063_040G1_scaffold_150_2
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1428..2234
DNA (807bp) protein (269aa)
Putative uncharacterized protein ygdL n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0D2_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31225.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_150_3
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2238..2681)
DNA (444bp) protein (148aa)
ygdK; sufE-like protein YgdK (EC:2.8.1.7)
Putative SufE-like protein YgdK n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0D3_ESCHE
Putative SufE-like protein YgdK {ECO:0000313|EMBL:GAB51441.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_150_4
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2682..3887)
DNA (1206bp) protein (402aa)
Cysteine sulfinate desulfinase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0D4_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31227.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
cysteine sulfinate desulfinase
L3_063_040G1_scaffold_150_5
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4078..4305
DNA (228bp) protein (76aa)
Putative uncharacterized protein ygdI n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0D5_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31228.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_150_6
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4663..5580
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0D6_ESCHE
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:GAB51444.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
gcvA; DNA-binding transcriptional activator GcvA
L3_063_040G1_scaffold_150_7
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5627..6022
DNA (396bp) protein (132aa)
Putative uncharacterized protein ygdD n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0D7_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31230.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_150_8
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6015..7115
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Ribosomal RNA large subunit methyltransferase M n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0D8_ESCHE
23S rRNA C2498 ribose 2'-O-ribose methyltransferase
L3_063_040G1_scaffold_150_9
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7167..7922)
DNA (756bp) protein (252aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00273675};; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Flap endonuclease Xni n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0D9_ESCHE
flap endonuclease-like protein
L3_063_040G1_scaffold_150_10
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8053..9420)
DNA (1368bp) protein (456aa)
L-serine dehydratase SdaB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0E0_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31233.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
L-serine dehydratase 1
L3_063_040G1_scaffold_150_11
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9487..10773)
DNA (1287bp) protein (429aa)
Serine transporter n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0E1_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31234.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
sdaC; serine transporter
L3_063_040G1_scaffold_150_12
unknown

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10822..10971
DNA (150bp) protein (50aa)

This feature has no annotations

L3_063_040G1_scaffold_150_13
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11239..12603)
DNA (1365bp) protein (455aa)
Putative uncharacterized protein ygdH n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0E2_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31235.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
LOG family protein ygdH
L3_063_040G1_scaffold_150_14
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12718..13563)
DNA (846bp) protein (282aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0E3_ESCHE
NADPH-dependent 7-cyano-7-deazaguanine reductase
L3_063_040G1_scaffold_150_15
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13631..14179
DNA (549bp) protein (183aa)
Protein Syd n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0E4_ESCHE
Protein Syd {ECO:0000256|HAMAP-Rule:MF_01104, ECO:0000256|SAAS:SAAS00064630}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
syd; syd protein
L3_063_040G1_scaffold_150_16
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14812..15141
DNA (330bp) protein (110aa)
Putative uncharacterized protein yqcC n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0E5_ESCHE
Putative uncharacterized protein yqcC {ECO:0000313|EMBL:GAB51453.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hypothetical protein
L3_063_040G1_scaffold_150_17
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15138..15923
DNA (786bp) protein (262aa)
Pseudouridine synthase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0E6_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31238.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
tRNA pseudouridine synthase C
L3_063_040G1_scaffold_150_18
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15942..16391
DNA (450bp) protein (150aa)
Putative uncharacterized protein yqcA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0E7_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31239.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
flavodoxin
L3_063_040G1_scaffold_150_19
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16863..18221
DNA (1359bp) protein (453aa)
Putative glucarate transporter n=2 Tax=Bacteria RepID=H5V0E8_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31240.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
glucarate transporter
L3_063_040G1_scaffold_150_20
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18218..19558
DNA (1341bp) protein (447aa)
Glucarate dehydratase-related protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0E9_ESCHE
Glucarate dehydratase-related protein {ECO:0000313|EMBL:GAB51457.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
mandelate racemase/muconate lactonizing protein
L3_063_040G1_scaffold_150_21
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19580..20923
DNA (1344bp) protein (448aa)
gudD; glucarate dehydratase (EC:4.2.1.40)
Glucarate dehydratase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0F0_ESCHE
Glucarate dehydratase {ECO:0000313|EMBL:GAB51458.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_150_22
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21034..22176
DNA (1143bp) protein (381aa)
Glycerate kinase GarK n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0F1_ESCHE
Enterobacter aerogenes strain DDE1 c20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU31243.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
glycerate kinase
L3_063_040G1_scaffold_150_23
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22607..23083
DNA (477bp) protein (159aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Clostridium colicanis 209318 RepID=N9WDR9_9CLOT
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:ENZ00985.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L3_063_040G1_scaffold_150_24
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23080..23847
DNA (768bp) protein (256aa)
Phosphotransferase system PTS sorbose-specific IIC subunit n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G2C6_ENTLS
PTS system sorbose-specific transporter subunit IIC
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:ADO50343.1}; Flags: Precursor;; TaxID=701347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter lignolyticus (strain SCF1).;"
L3_063_040G1_scaffold_150_25
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23860..24693
DNA (834bp) protein (278aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G2C5_ENTLS
PTS system mannose/fructose/sorbose family transporter subunit IID
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:ADO50342.1}; TaxID=701347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter lignolyticus (strain SCF1).;"
L3_063_040G1_scaffold_150_26
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24693..25124
DNA (432bp) protein (144aa)
PTS system fructose subfamily IIA component n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G2C4_ENTLS
PTS system fructose subfamily transporter subunit IIA
PTS system fructose subfamily IIA component {ECO:0000313|EMBL:ADO50341.1}; TaxID=701347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter lignolyticus (strain SCF1).;"
L3_063_040G1_scaffold_150_27
Hafnia alvei, Hafnia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25105..25821
DNA (717bp) protein (239aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Hafnia alvei ATCC 51873 RepID=G9YB12_HAFAL
GntR family transcriptional regulator {ECO:0000313|EMBL:KFC88830.1}; TaxID=910996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Hafnia.;" source="Hafnia alvei ATCC 13337.;"
GntR family transcriptional regulator
L3_063_040G1_scaffold_150_28
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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25823..26533
DNA (711bp) protein (237aa)
putative Glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Putative Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:CCO60333.1}; EC=3.5.99.6 {ECO:0000313|EMBL:CCO60333.1};; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo.;"
Putative Glucosamine-6-phosphate deaminase n=6 Tax=Vibrio nigripulchritudo RepID=U4KBY0_9VIBR
L3_063_040G1_scaffold_150_29
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26585..29338)
DNA (2754bp) protein (918aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Two-component histidine kinase BarA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0F2_ESCHE
hybrid sensory histidine kinase BarA
L3_063_040G1_scaffold_150_30
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29394..30695
DNA (1302bp) protein (434aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0F3_ESCHE
23S rRNA (uracil-5-)-methyltransferase rumA
Displaying items 1-30 of 67 in total

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