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L3_063_040G1_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_219_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(241..645)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003133235
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD22068.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_063_040G1_scaffold_219_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(812..1153)
DNA (342bp) protein (114aa)
PhnA family protein n=9 Tax=Clostridium perfringens RepID=H7CZU8_CLOPF
phnA; phnA family protein
PhnA family protein {ECO:0000313|EMBL:EIA15898.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_063_040G1_scaffold_219_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1223..2110)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97100.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
LysR-family transcriptional regulator
L3_063_040G1_scaffold_219_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2229..3422
DNA (1194bp) protein (398aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TM94_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD25131.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_063_040G1_scaffold_219_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3475..5070)
DNA (1596bp) protein (532aa)
beta-hexosaminidase (EC:3.2.1.52)
beta-N-acetylhexosaminidase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A3FC2
Uncharacterized protein {ECO:0000313|EMBL:EEH98644.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_063_040G1_scaffold_219_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5217..5807)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002E2DCB6
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
membrane protein
L3_063_040G1_scaffold_219_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5880..6512)
DNA (633bp) protein (211aa)
Pentapeptide repeat-containing protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6GLX8_9CLOT
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:CDB15162.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
pentapeptide repeat protein
L3_063_040G1_scaffold_219_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6689..7009
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZT6_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09666.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_063_040G1_scaffold_219_9
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7099..7782)
DNA (684bp) protein (228aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Lipoprotein-releasing ABC transporter ATP-binding protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XML2_9CLOT
ABC transporter
L3_063_040G1_scaffold_219_10
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7792..8949)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XYE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00949.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
L3_063_040G1_scaffold_219_11
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9107..9808
DNA (702bp) protein (234aa)
Signal transduction response regulator n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2V8_CLOA9
signal transduction response regulator
Signal transduction response regulator {ECO:0000313|EMBL:AFS78941.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_063_040G1_scaffold_219_12
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9798..11171
DNA (1374bp) protein (458aa)
sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Sensor signal transduction histidine kinase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1Z6_CLOA9
L3_063_040G1_scaffold_219_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11217..12509)
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
Enolase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BWK9_9CLOT
eno; phosphopyruvate hydratase
L3_063_040G1_scaffold_219_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12810..13481)
DNA (672bp) protein (224aa)
TrkA domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVD4_9CLOT
TrkA domain-containing protein {ECO:0000313|EMBL:EOR20670.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
TrkA domain-containing protein
L3_063_040G1_scaffold_219_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13491..14783)
DNA (1293bp) protein (431aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
TrkH family potassium uptake protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H385_9CLOT
TrkH family potassium uptake protein {ECO:0000313|EMBL:EEH97473.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_063_040G1_scaffold_219_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14987..17092
DNA (2106bp) protein (702aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
two-component sensor kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002880AD4
two-component sensor kinase
L3_063_040G1_scaffold_219_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17215..18069)
DNA (855bp) protein (285aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CSJ4_CLOPF
Membrane protein {ECO:0000313|EMBL:KJU71692.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_063_040G1_scaffold_219_18
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18084..18587)
DNA (504bp) protein (168aa)
GNAT family acetyltransferase n=1 Tax=Clostridium beijerinckii RepID=UPI0003032CCF
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AJH00013.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
GCN5-like N-acetyltransferase
L3_063_040G1_scaffold_219_19
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18673..19542)
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
Methionine aminopeptidase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KXH9_9CLOT
map; methionine aminopeptidase
L3_063_040G1_scaffold_219_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19759..20610
DNA (852bp) protein (284aa)
HAD phosphatase superfamily protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6R1_9CLOT
HAD phosphatase superfamily protein {ECO:0000313|EMBL:EOR25059.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
cof family hydrolase
L3_063_040G1_scaffold_219_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20646..21497
DNA (852bp) protein (284aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M687_9CLOT
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EHJ00803.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
RpiR family transcriptional regulator
L3_063_040G1_scaffold_219_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21597..22841)
DNA (1245bp) protein (415aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU9_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY26461.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
major facilitator superfamily transporter
L3_063_040G1_scaffold_219_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22838..23632)
DNA (795bp) protein (265aa)
fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC (EC:3.6.3.34)
Putative ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFK1_9CLOT
Putative ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EKY26460.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_063_040G1_scaffold_219_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23635..24642)
DNA (1008bp) protein (336aa)
Putative ferrichrome transport system permease protein FhuG n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEN7_9CLOT
Putative ferrichrome transport system permease protein FhuG {ECO:0000313|EMBL:EKY26459.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
transport system permease
L3_063_040G1_scaffold_219_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24642..25634)
DNA (993bp) protein (331aa)
Putative iron(3+)-hydroxamate import system permease protein FhuB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEQ4_9CLOT
Putative iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:EKY26458.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative membrane protein
L3_063_040G1_scaffold_219_26
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25621..26571)
DNA (951bp) protein (317aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFX9_9CLOT
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:EOR28202.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
putative secreted protein
L3_063_040G1_scaffold_219_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26775..27779
DNA (1005bp) protein (335aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU3_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY26456.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_063_040G1_scaffold_219_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27829..29922)
DNA (2094bp) protein (698aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
PAS domain S-box protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHM3_9CLOT
two-component sensor kinase
L3_063_040G1_scaffold_219_29
unknown

Not on your lists

comp(30253..30624)
DNA (372bp) protein (124aa)

This feature has no annotations

L3_063_040G1_scaffold_219_30
unknown

Not on your lists

30778..30963
DNA (186bp) protein (62aa)
MutS domain-containing protein n=1 Tax=Clostridium intestinale URNW RepID=U2N6C0_9CLOT
Displaying items 1-30 of 58 in total

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