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L3_063_040G1_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_223_1
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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188..772
DNA (585bp) protein (195aa)
Maf-like protein Y71_2163 n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q7Q1_9ENTR
Maf
Maf-like protein Y71_2163 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
L3_063_040G1_scaffold_223_2
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

813..2060
DNA (1248bp) protein (416aa)
Transport protein n=1 Tax=Arcobacter butzleri ED-1 RepID=G2HKK9_9PROT
Transmembrane transport protein {ECO:0000313|EMBL:KFC93096.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
major facilitator superfamily MFS_1
L3_063_040G1_scaffold_223_3
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2091..3047)
DNA (957bp) protein (319aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
Pseudouridine synthase n=2 Tax=Klebsiella oxytoca RepID=H3M3H8_KLEOX
23S rRNA pseudouridylate synthase
L3_063_040G1_scaffold_223_4
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3620..6871
DNA (3252bp) protein (1084aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
Ribonuclease E n=1 Tax=Enterobacter sp. R4-368 RepID=R9VV23_9ENTR
rne; ribonuclease E
L3_063_040G1_scaffold_223_5
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6913..7851)
DNA (939bp) protein (313aa)
LysR family transcriptional regulator n=1 Tax=Enterobacter cloacae RepID=UPI000367CDD6
LysR family transcriptional regulator {ECO:0000313|EMBL:KDE37223.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
LysR family transcriptional regulator
L3_063_040G1_scaffold_223_6
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7970..9184
DNA (1215bp) protein (405aa)
MFS transporter n=1 Tax=Enterobacter sp. R4-368 RepID=R9VSX3_9ENTR
MFS transporter
MFS transporter {ECO:0000313|EMBL:AGN88174.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_223_7
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9260..10210)
DNA (951bp) protein (317aa)
Flagellar hook-associated protein 3 n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YGX8_9ENTR
FlgL protein {ECO:0000313|EMBL:KIS44761.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
flgL; flagellar hook-associated protein FlgL
L3_063_040G1_scaffold_223_8
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10225..11865)
DNA (1641bp) protein (547aa)
Flagellar hook-associated protein FlgK n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IK85_9ENTR
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:GAL59153.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
flgK; flagellar hook protein FlgK
L3_063_040G1_scaffold_223_9
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11941..12897)
DNA (957bp) protein (319aa)
Flagellar rod assembly protein FlgJ n=1 Tax=Enterobacter sp. R4-368 RepID=R9VV19_9ENTR
flgJ; flagellar rod assembly protein FlgJ
Flagellar rod assembly protein FlgJ {ECO:0000313|EMBL:AHJ74292.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_223_10
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12897..13961)
DNA (1065bp) protein (355aa)
Flagellar P-ring protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IIZ8_9ENTR
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
flagellar basal-body P-ring protein
L3_063_040G1_scaffold_223_11
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14004..14711)
DNA (708bp) protein (236aa)
flagellar basal body L-ring protein n=1 Tax=Enterobacter cloacae RepID=UPI0002F40733
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
flgH; flagellar basal body L-ring protein
L3_063_040G1_scaffold_223_12
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14760..15542)
DNA (783bp) protein (261aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433 RepID=B5NIK0_SALET
flgG; flagellar basal-body rod protein FlgG (distal rod protein)
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:CEH21194.1}; TaxID=1327958 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Manhattan str. 111113.;"
L3_063_040G1_scaffold_223_13
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15558..16313)
DNA (756bp) protein (252aa)
Flagellar basal-body rod protein flgF n=1 Tax=Enterobacter cloacae S611 RepID=V5AMF6_ENTCL
Flagellar basal-body rod protein flgF {ECO:0000313|EMBL:ESS56414.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
flgF; flagellar basal body rod protein FlgF
L3_063_040G1_scaffold_223_14
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16334..17605)
DNA (1272bp) protein (424aa)
Flagellar hook protein flgE n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q7N7_9ENTR
Flagellar hook protein FlgE {ECO:0000313|EMBL:KDE37232.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
flagellar hook-basal body protein
L3_063_040G1_scaffold_223_15
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17632..18318)
DNA (687bp) protein (229aa)
Basal-body rod modification protein flgD n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IIZ4_9ENTR
FlgD protein {ECO:0000313|EMBL:KIS44475.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
flgD; flagellar basal body rod modification protein
L3_063_040G1_scaffold_223_16
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18331..18735)
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgC n=564 Tax=Salmonella choleraesuis RepID=FLGC_SALTI
flgC; flagellar basal body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1079477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Muenchen str. baa1594.;"
L3_063_040G1_scaffold_223_17
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18738..19154)
DNA (417bp) protein (139aa)
Flagellar basal body rod protein FlgB n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YGW9_9ENTR
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
flagellar biosynthesis protein FlgB
L3_063_040G1_scaffold_223_18
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19320..19985
DNA (666bp) protein (222aa)
Flagella basal body P-ring formation protein FlgA n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IK75_9ENTR
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
flgA; flagellar basal body P-ring biosynthesis protein FlgA
L3_063_040G1_scaffold_223_19
Cedecea neteri, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20082..20372
DNA (291bp) protein (97aa)
Flagellar biosynthesis anti-sigma factor FlgM n=1 Tax=Cedecea davisae DSM 4568 RepID=S3IWL9_9ENTR
Negative regulator of flagellin synthesis
Negative regulator of flagellin synthesis {ECO:0000313|EMBL:AIR03881.1}; TaxID=158822 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea neteri.;"
L3_063_040G1_scaffold_223_20
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20376..20798
DNA (423bp) protein (141aa)
Flagella synthesis chaperone protein FlgN n=1 Tax=Enterobacter sp. R4-368 RepID=R9VXJ5_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS44168.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
flagella synthesis chaperone protein FlgN
L3_063_040G1_scaffold_223_21
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20859..22394)
DNA (1536bp) protein (512aa)
Virulence factor mviN n=1 Tax=Enterobacter sp. MGH 38 RepID=V3LZE5_9ENTR
integral membrane protein MviN
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
L3_063_040G1_scaffold_223_22
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22501..23424)
DNA (924bp) protein (308aa)
virulence factor MviM n=1 Tax=Enterobacter cloacae RepID=UPI000314F65B
virulence factor MviM
Virulence factor MviM {ECO:0000313|EMBL:AHJ74304.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_223_23
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23427..24080)
DNA (654bp) protein (218aa)
UPF0502 protein Y71_2139 n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IK69_9ENTR
UPF0502 protein LG58_1906 {ECO:0000256|HAMAP-Rule:MF_01584}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
hypothetical protein
L3_063_040G1_scaffold_223_24
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24090..24674)
DNA (585bp) protein (195aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1Q7M5_9ENTR
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:KDE37242.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
alanine acetyltransferase
L3_063_040G1_scaffold_223_25
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24907..26115
DNA (1209bp) protein (403aa)
Multidrug resistance protein MdtH n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S8A2_ENTAL
Multidrug resistance protein mdtH
Multidrug resistance protein MdtH {ECO:0000256|HAMAP-Rule:MF_01529, ECO:0000256|SAAS:SAAS00016561}; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
L3_063_040G1_scaffold_223_26
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26180..26827
DNA (648bp) protein (216aa)
Glutaredoxin, GrxB family n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YGW0_9ENTR
Glutaredoxin {ECO:0000313|EMBL:KDE37244.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
glutaredoxin
L3_063_040G1_scaffold_223_27
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26943..27503
DNA (561bp) protein (187aa)
Lipoprotein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VWZ3_9ENTR
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AGN88153.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_223_28
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27740..28786
DNA (1047bp) protein (349aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
Dihydroorotase n=1 Tax=Klebsiella oxytoca 10-5246 RepID=H3MKG9_KLEOX
dihydroorotase
L3_063_040G1_scaffold_223_29
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28861..29106
DNA (246bp) protein (82aa)
DNA-damage-inducible protein I n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IIY1_9ENTR
DNA-damage-inducible protein I {ECO:0000313|EMBL:EJI87222.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
damage-inducible protein I
L3_063_040G1_scaffold_223_30
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29377..29631
DNA (255bp) protein (85aa)
Biofilm regulator n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TT66_CITRI
bssS; biofilm regulator
Biofilm regulator {ECO:0000313|EMBL:CBG87890.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
Displaying items 1-30 of 56 in total

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