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L3_063_040G1_scaffold_252

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_252_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(484..1659)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UIB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC66933.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
major facilitator superfamily protein
L3_063_040G1_scaffold_252_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1889..2782)
DNA (894bp) protein (298aa)
Protein-export membrane protein SecF n=4 Tax=Veillonella parvula RepID=D1BLM5_VEIPT
protein-export membrane protein SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L3_063_040G1_scaffold_252_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2779..4053)
DNA (1275bp) protein (425aa)
Protein translocase subunit SecD n=3 Tax=Veillonella parvula RepID=T0T7B8_9FIRM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
protein-export membrane protein SecD
L3_063_040G1_scaffold_252_4
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4072..4638)
DNA (567bp) protein (189aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KLS0_9FIRM
5-formyltetrahydrofolate cyclo-ligase
L3_063_040G1_scaffold_252_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4638..4928)
DNA (291bp) protein (97aa)
Preprotein translocase, YajC subunit n=6 Tax=Veillonella RepID=D1BLM2_VEIPT
preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EGL76670.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L3_063_040G1_scaffold_252_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5006..6121)
DNA (1116bp) protein (372aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Queuine tRNA-ribosyltransferase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLM1_VEIPT
queuine tRNA-ribosyltransferase
L3_063_040G1_scaffold_252_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6130..7155)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQU5_9FIRM
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
L3_063_040G1_scaffold_252_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7167..8816)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T7B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC66926.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
SpoIID/LytB domain-containing protein
L3_063_040G1_scaffold_252_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8819..9823)
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLL8_VEIPT
Holliday junction DNA helicase RuvB
L3_063_040G1_scaffold_252_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9826..10434)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L229_9FIRM
Holliday junction DNA helicase RuvA
L3_063_040G1_scaffold_252_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10434..10928)
DNA (495bp) protein (165aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Crossover junction endodeoxyribonuclease RuvC n=6 Tax=Veillonella RepID=D1BLL6_VEIPT
crossover junction endodeoxyribonuclease RuvC
L3_063_040G1_scaffold_252_12
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11132..11869)
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein HMPREF0873_01757 n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KLS7_9FIRM
Probable transcriptional regulatory protein HMPREF0873_01757 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
hypothetical protein
L3_063_040G1_scaffold_252_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11879..12451)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L232_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EGL76673.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
L3_063_040G1_scaffold_252_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12510..13070)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Veillonella RepID=D1BLL3_VEIPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ24270.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_063_040G1_scaffold_252_15
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13082..13513)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UAK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI99062.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_063_040G1_scaffold_252_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13524..14618)
DNA (1095bp) protein (365aa)
UPI0003D66E09 related cluster n=1 Tax=unknown RepID=UPI0003D66E09
Uncharacterized protein {ECO:0000313|EMBL:ETI99063.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_063_040G1_scaffold_252_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14697..15407)
DNA (711bp) protein (237aa)
UPI0003D67CFA related cluster n=1 Tax=unknown RepID=UPI0003D67CFA
Glutathionylspermidine synthase-like protein {ECO:0000313|EMBL:ETI99064.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
glutathionylspermidine synthase
L3_063_040G1_scaffold_252_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15414..16004)
DNA (591bp) protein (197aa)
UPI0003D67CFA related cluster n=1 Tax=unknown RepID=UPI0003D67CFA
Glutathionylspermidine synthase-like protein {ECO:0000313|EMBL:ETI99064.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
glutathionylspermidine synthase
L3_063_040G1_scaffold_252_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16019..16591)
DNA (573bp) protein (191aa)
UPI0003D6520D related cluster n=1 Tax=unknown RepID=UPI0003D6520D
Uncharacterized protein {ECO:0000313|EMBL:ETI99065.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_063_040G1_scaffold_252_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16636..17682)
DNA (1047bp) protein (349aa)
UPI0003D6062F related cluster n=1 Tax=unknown RepID=UPI0003D6062F
Uncharacterized protein {ECO:0000313|EMBL:ETI99066.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_063_040G1_scaffold_252_21
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17679..18494)
DNA (816bp) protein (272aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI0003D5DC27 related cluster n=1 Tax=unknown RepID=UPI0003D5DC27
tRNA (guanine-N1)-methyltransferase
L3_063_040G1_scaffold_252_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18615..19112)
DNA (498bp) protein (166aa)
Ribosome maturation factor RimM n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L240_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
16S rRNA processing protein RimM
L3_063_040G1_scaffold_252_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19112..19519)
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Veillonella parvula RepID=D1BLK5_VEIPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI99069.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L3_063_040G1_scaffold_252_24
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19534..19761)
DNA (228bp) protein (76aa)
UPF0109 protein Vpar_0578 n=11 Tax=Veillonella RepID=D1BLK4_VEIPT
RNA-binding protein
UPF0109 protein HMPREF0870_01203 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
L3_063_040G1_scaffold_252_25
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19783..20046)
DNA (264bp) protein (88aa)
30S ribosomal protein S16 n=10 Tax=Veillonella RepID=D1BLK3_VEIPT
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
L3_063_040G1_scaffold_252_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20107..21459)
DNA (1353bp) protein (451aa)
Signal recognition particle protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLK2_VEIPT
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_063_040G1_scaffold_252_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21449..21784)
DNA (336bp) protein (112aa)
UPF0122 protein HMPREF9323_1693 n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L245_9FIRM
UPF0122 protein HMPREF9323_1693 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
helix-turn-helix protein YlxM/p13 family protein
L3_063_040G1_scaffold_252_28
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22084..23409
DNA (1326bp) protein (442aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Veillonella RepID=D1YQS7_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFB85674.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
L3_063_040G1_scaffold_252_29
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23598..24125)
DNA (528bp) protein (176aa)
Putative membrane spanning protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KS78_9FIRM
Putative membrane spanning protein {ECO:0000313|EMBL:EFG24123.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
hypothetical protein
L3_063_040G1_scaffold_252_30
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24333..26507)
DNA (2175bp) protein (725aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EGL76630.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EGL76630.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Copper-exporting ATPase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L248_9FIRM
copper-translocating P-type ATPase
Displaying items 1-30 of 44 in total

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