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L3_063_040G1_scaffold_259

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_259_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1079477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Muenchen str. baa1594.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Shigella boydii RepID=Q2EVL6_SHIBO
L3_063_040G1_scaffold_259_2
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199..1068)
DNA (870bp) protein (290aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VGD2_9ENTR
kinase
L3_063_040G1_scaffold_259_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1065..1688)
DNA (624bp) protein (208aa)
Outer-membrane lipoprotein LolB n=2 Tax=Citrobacter freundii RepID=K8QM87_CITFR
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
lolB; outer membrane lipoprotein LolB
L3_063_040G1_scaffold_259_4
Lelliottia amnigena, Lelliottia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1890..3146
DNA (1257bp) protein (419aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1439331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Lelliottia.;" source="Lelliottia amnigena CHS 78.;"
Glutamyl-tRNA reductase n=1 Tax=Enterobacter cloacae UCICRE 11 RepID=V3DB95_ENTCL
L3_063_040G1_scaffold_259_5
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3183..4265
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IT21_9ENTR
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
prfA; peptide chain release factor 1
L3_063_040G1_scaffold_259_6
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4265..5104
DNA (840bp) protein (280aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
Release factor glutamine methyltransferase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IT58_9ENTR
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
L3_063_040G1_scaffold_259_7
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5111..5503
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Enterobacter cloacae RepID=UPI0002ECAECB
siroheme synthase
Siroheme synthase {ECO:0000313|EMBL:AHJ73699.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_259_8
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5507..6316
DNA (810bp) protein (270aa)
SirB1 protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IT37_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS43855.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
hypothetical protein
L3_063_040G1_scaffold_259_9
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6354..7208
DNA (855bp) protein (285aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VG23_9ENTR
L3_063_040G1_scaffold_259_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7362..9224)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti (strain BL225C) RepID=F6BZ60_SINMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG06551.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
L3_063_040G1_scaffold_259_11
unknown

Not on your lists

comp(9221..10390)
DNA (1170bp) protein (390aa)

This feature has no annotations

L3_063_040G1_scaffold_259_12
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10401..11525)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CM00_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU73299.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
L3_063_040G1_scaffold_259_13
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11798..12898)
DNA (1101bp) protein (367aa)
Putative calcium/proton exchanger n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZDD0_9ENTR
Putative calcium/proton exchanger {ECO:0000313|EMBL:EFC57018.1}; TaxID=500639 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cancerogenus ATCC 35316.;"
calcium/sodium:proton antiporter
L3_063_040G1_scaffold_259_14
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13168..13398
DNA (231bp) protein (77aa)
Cation transport regulator n=1 Tax=Enterobacter sp. R4-368 RepID=R9VIG2_9ENTR
chaB; cation transport regulator
Cation transport regulator {ECO:0000313|EMBL:AHJ73703.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_259_15
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13577..14272
DNA (696bp) protein (232aa)
transporter n=1 Tax=Enterobacter cloacae RepID=UPI000314E4B7
transporter
Transporter {ECO:0000313|EMBL:AHJ73704.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_259_16
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14286..14528)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YQU1_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS44469.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
hypothetical protein
L3_063_040G1_scaffold_259_17
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14744..16528)
DNA (1785bp) protein (595aa)
HAMP domain protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YQZ7_9ENTR
HAMP domain protein {ECO:0000313|EMBL:EJI90625.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
methyl-accepting chemotaxis protein
L3_063_040G1_scaffold_259_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16637..16990)
DNA (354bp) protein (118aa)
Protein ychN n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SK27_CITFR
Protein ychN {ECO:0000313|EMBL:ETX63256.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L3_063_040G1_scaffold_259_19
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17058..18251
DNA (1194bp) protein (398aa)
Nitrate regulatory protein n=1 Tax=Klebsiella pneumoniae UCICRE 14 RepID=V3EFW3_KLEPN
Nitrate regulatory protein {ECO:0000313|EMBL:CDN07153.1}; TaxID=1463164 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. 07A044.;"
nitrate regulatory protein
L3_063_040G1_scaffold_259_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18483..19742
DNA (1260bp) protein (420aa)
Nitrate-binding proteint n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WBB4_ENT38
nitrate-binding proteint
Uncharacterized protein {ECO:0000313|EMBL:KDF17890.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
L3_063_040G1_scaffold_259_21
Enterobacter sp. 638, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19744..20625
DNA (882bp) protein (294aa)
Nitrate ABC transporter, inner membrane subunit n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WBB3_ENT38
nitrate ABC transporter, inner membrane subunit
Nitrate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABP60993.1}; TaxID=399742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. (strain 638).;"
L3_063_040G1_scaffold_259_22
Enterobacter sp. 42324, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20627..21421
DNA (795bp) protein (265aa)
Nitrate ABC transporter, ATPase subunits C and D n=2 Tax=Enterobacter cloacae RepID=D5C6M8_ENTCC
nitrate ABC transporter ATPases C and D
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJM37932.1}; TaxID=1619249 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 42324.;"
L3_063_040G1_scaffold_259_23
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21432..25499
DNA (4068bp) protein (1356aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AG20_CITK8
Uncharacterized protein {ECO:0000313|EMBL:ABV12433.1}; TaxID=290338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696).;"
hypothetical protein
L3_063_040G1_scaffold_259_24
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25496..28072
DNA (2577bp) protein (859aa)
Nitrate reductase n=1 Tax=Klebsiella sp. OBRC7 RepID=J5Y5K2_9ENTR
nitrate reductase
Nitrate reductase {ECO:0000313|EMBL:AJF73757.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
L3_063_040G1_scaffold_259_25
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28049..28600)
DNA (552bp) protein (184aa)
Phosphatidylethanolamine-binding protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VIG5_9ENTR
phosphatidylethanolamine-binding protein
Phosphatidylethanolamine-binding protein {ECO:0000313|EMBL:AGN83926.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_259_26
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28765..30186
DNA (1422bp) protein (474aa)
Invasin n=1 Tax=Enterobacter sp. R4-368 RepID=R9VGE3_9ENTR
invasin
Invasin {ECO:0000313|EMBL:AGN83927.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_259_27
Enterobacter sp. MGH 14, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30183..30833)
DNA (651bp) protein (217aa)
Nitrate/nitrite response regulator protein narL n=18 Tax=Enterobacter RepID=G8LF66_ENTCL
nitrate/nitrite response regulator protein narL
Nitrate/nitrite response regulator protein narL {ECO:0000313|EMBL:ERP07921.1}; TaxID=1329823 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter sp. MGH 14.;"
L3_063_040G1_scaffold_259_28
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30826..32625)
DNA (1800bp) protein (600aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
Nitrate/nitrite sensor protein NarX n=1 Tax=Enterobacter sp. R4-368 RepID=R9VG33_9ENTR
nitrate/nitrite sensor protein NarX
L3_063_040G1_scaffold_259_29
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32932..34326
DNA (1395bp) protein (465aa)
Nitrate transporter n=1 Tax=Enterobacter sp. R4-368 RepID=R9VIG9_9ENTR
nitrate transporter
Nitrate transporter {ECO:0000313|EMBL:AGN83931.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_259_30
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34719..38462
DNA (3744bp) protein (1248aa)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1JGG5_CITAM
Nitrate reductase {ECO:0000313|EMBL:KEY46416.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
Displaying items 1-30 of 35 in total

View Taxonomy