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L3_063_040G1_scaffold_324

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_324_1
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..186
DNA (186bp) protein (62aa)
Murein lipoprotein n=2 Tax=Enterobacteriaceae RepID=J0MC18_9ENTR
lpp; major outer membrane lipoprotein precursor Lpp
Murein lipoprotein {ECO:0000313|EMBL:KJH60333.1}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
L3_063_040G1_scaffold_324_2
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..1236)
DNA (987bp) protein (329aa)
L,D-transpeptidase {ECO:0000313|EMBL:KFC92270.1}; EC=2.-.-.- {ECO:0000313|EMBL:KFC92270.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Uncharacterized protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M5H8_ENTBF
hypothetical protein
L3_063_040G1_scaffold_324_3
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1350..1766)
DNA (417bp) protein (139aa)
Cysteine desulfuration protein SufE n=4 Tax=Klebsiella oxytoca RepID=H3LPA4_KLEOX
Cysteine desulfuration protein SufE {ECO:0000256|HAMAP-Rule:MF_01832, ECO:0000256|SAAS:SAAS00009949}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
cysteine desufuration protein SufE
L3_063_040G1_scaffold_324_4
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1780..3000)
DNA (1221bp) protein (407aa)
Cysteine desulfurase {ECO:0000256|HAMAP-Rule:MF_01831, ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_01831, ECO:0000256|RuleBase:RU004506};; Selenocysteine beta-lyase {ECO:0000256|HAMAP-Rule:MF_01831}; Selenocysteine lyase {ECO:0000256|HAMAP-Rule:MF_01831}; Selenocysteine reductase {ECO:0000256|HAMAP-Rule:MF_01831}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Cysteine desulfurase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M239_ENTBF
cysteine desulfurase-like protein, SufS subfamily
L3_063_040G1_scaffold_324_5
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2997..4271)
DNA (1275bp) protein (425aa)
FeS cluster assembly protein sufD n=2 Tax=Klebsiella RepID=H3L924_KLEOX
Iron-sulfur cluster assembly protein {ECO:0000313|EMBL:KFC92273.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
FeS assembly protein SufD
L3_063_040G1_scaffold_324_6
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4246..4992)
DNA (747bp) protein (249aa)
Iron-sulfur cluster assembly ATPase protein {ECO:0000313|EMBL:KFC92274.1}; EC=3.6.1.15 {ECO:0000313|EMBL:KFC92274.1};; EC=3.6.1.3 {ECO:0000313|EMBL:KFC92274.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
FeS assembly ATPase SufC n=2 Tax=Citrobacter RepID=C1M3Z9_9ENTR
sufC; cysteine desulfurase
L3_063_040G1_scaffold_324_7
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5009..6496)
DNA (1488bp) protein (496aa)
FeS cluster assembly protein sufB n=5 Tax=Klebsiella pneumoniae RepID=K1P9F4_KLEPN
Iron-sulfur cluster assembly protein {ECO:0000313|EMBL:KFC92275.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
cysteine desulfurase
L3_063_040G1_scaffold_324_8
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6507..6875)
DNA (369bp) protein (123aa)
Protein sufA n=1 Tax=Escherichia coli KTE146 RepID=L4J718_ECOLX
SufA family iron-sulfur cluster assembly iron binding protein {ECO:0000313|EMBL:KFC92276.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
sufA; iron-sulfur cluster assembly scaffold protein
L3_063_040G1_scaffold_324_9
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7721..9241
DNA (1521bp) protein (507aa)
Diguanylate cyclase n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G5H7_ENTLS
Diguanylate cyclase {ECO:0000313|EMBL:KHT32850.1}; TaxID=555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora; subsp. carotovora).;"
diguanylate cyclase
L3_063_040G1_scaffold_324_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9364..10410)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4W0_9ENTR
Outer membrane protein A {ECO:0000313|EMBL:ETX63040.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
L3_063_040G1_scaffold_324_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10901..11419
DNA (519bp) protein (173aa)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SIW7_CITFR
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ETX64363.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypoxanthine phosphoribosyltransferase
L3_063_040G1_scaffold_324_12
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11700..11903
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=M9VVD7_RAOOR
Putative cytoplasmic protein {ECO:0000313|EMBL:KFC99164.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
hypothetical protein
L3_063_040G1_scaffold_324_13
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11956..13218)
DNA (1263bp) protein (421aa)
DNA polymerase V subunit UmuC (EC:2.7.7.7)
DNA polymerase V subunit UmuC n=2 Tax=Enterobacter cloacae subsp. cloacae GS1 RepID=I4ZIB7_ENTCL
Error-prone, lesion bypass DNA polymerase V (UmuC) {ECO:0000313|EMBL:CDL31411.1}; TaxID=1432556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae ISC8.;"
L3_063_040G1_scaffold_324_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13221..13640)
DNA (420bp) protein (140aa)
DNA polymerase V subunit UmuD n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K621_CITAM
DNA polymerase V subunit UmuD {ECO:0000313|EMBL:AGE94298.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
umuD; UmuD
L3_063_040G1_scaffold_324_15
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14260..15966
DNA (1707bp) protein (569aa)
Peptidoglycan synthetase {ECO:0000313|EMBL:KFC99163.1}; EC=2.4.1.129 {ECO:0000313|EMBL:KFC99163.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Cell division protein FtsI n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1TQB3_9ENTR
peptidoglycan synthase
L3_063_040G1_scaffold_324_16
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16019..16429)
DNA (411bp) protein (137aa)
1,4-dihydroxy-2-naphthoyl-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936}; Short=DHNA-CoA hydrolase {ECO:0000256|HAMAP-Rule:MF_01936};; EC=3.1.2.28 {ECO:0000256|HAMAP-Rule:MF_01936};; DHNA-CoA thioesterase {ECO:0000256|HAMAP-Rule:MF_01936}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Thioesterase superfamily protein n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G5Y6_ENTLS
thioesterase superfamily protein
L3_063_040G1_scaffold_324_17
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16426..19482)
DNA (3057bp) protein (1019aa)
Lactate dehydrogenase family Fe-S protein {ECO:0000313|EMBL:KFC99161.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFC99161.1};; EC=1.1.-.- {ECO:0000313|EMBL:KFC99161.1};; EC=1.3.1.98 {ECO:0000313|EMBL:KFC99161.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
FAD/FMN-dependent dehydrogenase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M5G1_ENTBF
FAD/FMN-dependent dehydrogenase
L3_063_040G1_scaffold_324_18
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19741..20862
DNA (1122bp) protein (374aa)
Putative permease n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M5D3_ENTBF
Putative membrane protein {ECO:0000313|EMBL:KFC99160.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
putative permease
L3_063_040G1_scaffold_324_19
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21189..23558)
DNA (2370bp) protein (790aa)
Beta-xylosidase {ECO:0000313|EMBL:KFC99159.1}; EC=3.2.1.- {ECO:0000313|EMBL:KFC99159.1};; EC=3.2.1.37 {ECO:0000313|EMBL:KFC99159.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Beta-glucosidase-like glycosyl hydrolase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M232_ENTBF
beta-glucosidase-like glycosyl hydrolase
L3_063_040G1_scaffold_324_20
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23792..26170)
DNA (2379bp) protein (793aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Phosphoenolpyruvate synthase n=2 Tax=Citrobacter koseri RepID=A8AH91_CITK8
phosphoenolpyruvate synthase
L3_063_040G1_scaffold_324_21
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26500..27333
DNA (834bp) protein (278aa)
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Putative phosphoenolpyruvate synthase regulatory protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M3T3_ENTBF
hypothetical protein
L3_063_040G1_scaffold_324_22
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27487..28533
DNA (1047bp) protein (349aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M5F7_ENTBF
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
L3_063_040G1_scaffold_324_23
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28884..30326)
DNA (1443bp) protein (481aa)
UPF0061 protein D782_1951 n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M228_ENTBF
UPF0061 protein ydiU {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
hypothetical protein
L3_063_040G1_scaffold_324_24
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30388..31101)
DNA (714bp) protein (238aa)
EAL domain-containing protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M240_ENTBF
EAL domain-containing protein
EAL domain-containing protein {ECO:0000313|EMBL:AGB77938.1}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
L3_063_040G1_scaffold_324_25
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31381..31845)
DNA (465bp) protein (155aa)
Cell wall-associated hydrolase, invasion-associated protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M3S6_ENTBF
Putative lipoprotein {ECO:0000313|EMBL:KFC98876.1}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
cell wall-associated hydrolase, invasion-associated protein
L3_063_040G1_scaffold_324_26
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31942..32703)
DNA (762bp) protein (254aa)
ATPase component of an ABC superfamily vitamin B12 transporter {ECO:0000313|EMBL:KFC98877.1}; EC=3.6.1.15 {ECO:0000313|EMBL:KFC98877.1};; EC=3.6.1.3 {ECO:0000313|EMBL:KFC98877.1};; EC=3.6.3.33 {ECO:0000313|EMBL:KFC98877.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
ABC-type cobalamin transport system, ATPase component n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M5F2_ENTBF
ABC-type cobalamin transport system, ATPase component
L3_063_040G1_scaffold_324_27
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32700..33254)
DNA (555bp) protein (185aa)
glutathione peroxidase n=1 Tax=Enterobacter cloacae RepID=UPI00030B4807
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
btuE; glutathione peroxidase
L3_063_040G1_scaffold_324_28
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33283..34263)
DNA (981bp) protein (327aa)
Vitamin B12 import system permease protein BtuC n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M223_ENTBF
Vitamin B12 import system permease protein BtuC {ECO:0000256|HAMAP-Rule:MF_01004, ECO:0000256|SAAS:SAAS00165801}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
ABC-type cobalamin transport system, permease component
L3_063_040G1_scaffold_324_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34364..34663)
DNA (300bp) protein (100aa)
Integration host factor subunit alpha n=13 Tax=Enterobacteriaceae RepID=L0M236_ENTBF
ihfA; integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Displaying 29 items

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