ggKbase home page

L3_063_040G1_scaffold_328

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_328_1
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..6924)
DNA (6924bp) protein (2308aa)
adhesin n=1 Tax=Variovorax paradoxus RepID=UPI00037FEECD
PilY1 family type IV fimbrial biogenesis protein {ECO:0000313|EMBL:KFC96135.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
YadA domain protein
L3_063_040G1_scaffold_328_2
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6962..7726)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WWN6_PSEDE
Uncharacterized protein {ECO:0000313|EMBL:KFC96134.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
hypothetical protein
L3_063_040G1_scaffold_328_3
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7858..8277)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZGB7_9ENTR
Signal transduction response regulator {ECO:0000313|EMBL:KFC96133.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
hypothetical protein
L3_063_040G1_scaffold_328_4
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8987..9877
DNA (891bp) protein (297aa)
Transcriptional regulator, CadC n=1 Tax=Enterobacter lignolyticus (strain SCF1) RepID=E3G9B3_ENTLS
Putative MarT family transcriptional regulator {ECO:0000313|EMBL:KFC96132.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
transcriptional regulator CadC
L3_063_040G1_scaffold_328_5
unknown

Not on your lists

9867..10334
DNA (468bp) protein (156aa)

This feature has no annotations

L3_063_040G1_scaffold_328_6
unknown

Not on your lists

10443..10742
DNA (300bp) protein (100aa)

This feature has no annotations

L3_063_040G1_scaffold_328_7
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10779..12299)
DNA (1521bp) protein (507aa)
Aldehyde dehydrogenase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2B6_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35661.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
aldehyde dehydrogenase
L3_063_040G1_scaffold_328_8
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12529..14286
DNA (1758bp) protein (586aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2B5_ESCHE
Putative uncharacterized protein {ECO:0000313|EMBL:GAB52123.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
ATPase AAA
L3_063_040G1_scaffold_328_9
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14283..14672)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2B4_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35659.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
rhodanese
L3_063_040G1_scaffold_328_10
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14766..15731
DNA (966bp) protein (322aa)
Putative AraC family transcriptional regulator n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2B3_ESCHE
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAB52121.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
ftrA; transcriptional regulator
L3_063_040G1_scaffold_328_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15857..15952
DNA (96bp) protein (32aa)
Uncharacterized protein YneM n=682 Tax=Enterobacteriaceae RepID=YNEM_ECOLI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI21076.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L3_063_040G1_scaffold_328_12
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16208..16543)
DNA (336bp) protein (112aa)
Putative uncharacterized protein ydgC n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2B1_ESCHE
Putative uncharacterized protein ydgC {ECO:0000313|EMBL:GAB52119.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
membrane protein
L3_063_040G1_scaffold_328_13
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16693..16965
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2B0_ESCHE
Putative uncharacterized protein {ECO:0000313|EMBL:GAB52118.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_328_14
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16962..17186)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2A9_ESCHE
Putative uncharacterized protein {ECO:0000313|EMBL:GAB52117.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_328_15
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17254..18174)
DNA (921bp) protein (307aa)
Lipid A biosynthesis palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; EC=2.3.1.242 {ECO:0000256|HAMAP-Rule:MF_01943};; Kdo(2)-lipid IV(A) palmitoleoyltransferase {ECO:0000256|HAMAP-Rule:MF_01943}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Ddg protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2A8_ESCHE
ddg; lipid A biosynthesis palmitoleoyl acyltransferase
L3_063_040G1_scaffold_328_16
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18662..20704)
DNA (2043bp) protein (681aa)
Dipeptidyl carboxypeptidase II n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2A6_ESCHE
Dipeptidyl carboxypeptidase II {ECO:0000313|EMBL:GAB52114.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
dipeptidyl carboxypeptidase II
L3_063_040G1_scaffold_328_17
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20854..21603
DNA (750bp) protein (250aa)
3-hydroxy acid dehydrogenase YdfG n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2A5_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35653.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
malonic semialdehyde reductase
L3_063_040G1_scaffold_328_18
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21686..22375
DNA (690bp) protein (230aa)
Putative GntR family transcriptional regulator YdfH n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2A4_ESCHE
Putative GntR family transcriptional regulator YdfH {ECO:0000313|EMBL:GAB52112.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
GntR family transcriptional regulator
L3_063_040G1_scaffold_328_19
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22489..22692
DNA (204bp) protein (68aa)
Putative selenoprotein ydfZ n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6SI88_ENTCL
putative selenoprotein ydfZ
Putative selenoprotein ydfZ {ECO:0000313|EMBL:AEW73456.1}; TaxID=1045856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae EcWSU1.;"
L3_063_040G1_scaffold_328_20
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22731..24014)
DNA (1284bp) protein (428aa)
Transporter YjjL n=2 Tax=Escherichia coli RepID=T9G7N1_ECOLX
transport protein YjjL,hypothetical t ransport protein yjjL
Transporter YjjL {ECO:0000313|EMBL:EOU46986.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L3_063_040G1_scaffold_328_21
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24247..25698)
DNA (1452bp) protein (484aa)
Putative oxidoreductase YdfI n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2A2_ESCHE
Putative oxidoreductase YdfI {ECO:0000313|EMBL:GAB52110.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
ydfI; protein YdfI
L3_063_040G1_scaffold_328_22
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25753..27303)
DNA (1551bp) protein (517aa)
Glucuronide transporter n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2A1_ESCHE
Glucuronide transporter {ECO:0000313|EMBL:GAB52109.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
major Facilitator Superfamily transporter
L3_063_040G1_scaffold_328_23
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27331..28737)
DNA (1407bp) protein (469aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Uronate isomerase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V2A0_ESCHE
uxaC; uronate isomerase
L3_063_040G1_scaffold_328_24
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28783..29997)
DNA (1215bp) protein (405aa)
Starvation-sensing protein RspA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V299_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35647.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
bifunctional D-altronate/D-mannonate dehydratase
L3_063_040G1_scaffold_328_25
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30145..30471)
DNA (327bp) protein (109aa)
UPF0060 membrane protein YnfA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V298_ESCHE
UPF0060 membrane protein YnfA {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
ynfA; hypothetical protein
L3_063_040G1_scaffold_328_26
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30587..30922
DNA (336bp) protein (112aa)
UPF0482 protein YnfB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V297_ESCHE
UPF0482 protein SR38_00100 {ECO:0000256|HAMAP-Rule:MF_01581}; Flags: Precursor;; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_328_27
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30976..31533
DNA (558bp) protein (186aa)
speG; spermidine N1-acetyltransferase (EC:2.3.1.57)
Spermidine N(1)-acetyltransferase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V296_ESCHE
Spermidine N(1)-acetyltransferase {ECO:0000313|EMBL:GAB52104.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_328_28
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31560..32270)
DNA (711bp) protein (237aa)
Putative uncharacterized protein ynfC n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V295_ESCHE
Putative uncharacterized protein ynfC {ECO:0000313|EMBL:GAB52103.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
lipoprotein
L3_063_040G1_scaffold_328_29
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32380..32682
DNA (303bp) protein (101aa)
Putative uncharacterized protein ynfD n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V294_ESCHE
Enterobacter aerogenes strain DDE1 c5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU35643.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_328_30
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32718..34058)
DNA (1341bp) protein (447aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69)
N-acetylmuramic acid-specific phosphotransferase system enzyme IIBC component n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V293_ESCHE
N-acetylmuramic acid-specific phosphotransferase system enzyme IIBC component {ECO:0000313|EMBL:GAB52101.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Displaying 30 items

View Taxonomy