ggKbase home page

L3_063_040G1_scaffold_345

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_345_1
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..363)
DNA (363bp) protein (121aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7H0_ESCHE
L3_063_040G1_scaffold_345_2
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

397..1116
DNA (720bp) protein (240aa)
Putative uncharacterized protein yafS n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7H1_ESCHE
Enterobacter aerogenes strain DDE1 c12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33750.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_345_3
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1109..1585)
DNA (477bp) protein (159aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Ribonuclease H n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7H2_ESCHE
ribonuclease H
L3_063_040G1_scaffold_345_4
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1638..2369
DNA (732bp) protein (244aa)
DNA polymerase III subunit epsilon n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V7H3_ESCHE
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:GAB53931.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
DNA polymerase III subunit epsilon
L3_063_040G1_scaffold_345_5
unknown

Not on your lists

comp(2598..2885)
DNA (288bp) protein (96aa)

This feature has no annotations

L3_063_040G1_scaffold_345_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2941..3420)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli E101 RepID=H1E8C1_ECOLX
hcp; Secreted protein Hcp
Hcp {ECO:0000313|EMBL:EYV07584.1}; TaxID=1446596 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:NM str. 2010C-3526.;"
L3_063_040G1_scaffold_345_7
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3432..4802)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Infantis str. SARB27 RepID=G4C0X2_SALIN
Uncharacterized protein {ECO:0000313|EMBL:EHB41247.1}; TaxID=596155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Infantis str. SARB27.;"
ImpA domain-containing protein
L3_063_040G1_scaffold_345_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4847..8377)
DNA (3531bp) protein (1177aa)
Type VI secretion protein IcmF n=3 Tax=Escherichia coli RepID=E9Z243_ECOLX
Type VI secretion protein IcmF {ECO:0000313|EMBL:KFD77154.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative type VI secretion system protein
L3_063_040G1_scaffold_345_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8390..9799)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=76 Tax=Escherichia coli RepID=B7N882_ECOLU
Type VI secretion protein {ECO:0000313|EMBL:KHI29850.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative type VI secretion system protein
L3_063_040G1_scaffold_345_10
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9804..10538)
DNA (735bp) protein (245aa)
Type VI secretion-associated protein, VC_A0118 family n=1 Tax=Salmonella enterica subsp. enterica serovar Infantis str. SARB27 RepID=G4C0X5_SALIN
type VI secretion protein
Type VI secretion-associated protein, VC_A0118 family {ECO:0000313|EMBL:EHB41250.1}; TaxID=596155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Infantis str. SARB27.;"
L3_063_040G1_scaffold_345_11
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10535..13300)
DNA (2766bp) protein (922aa)
Type VI secretion ATPase, ClpV1 family n=1 Tax=Salmonella enterica subsp. enterica serovar Infantis str. SARB27 RepID=G4C0X6_SALIN
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:EHB41251.1}; TaxID=596155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Infantis str. SARB27.;"
protein disaggregation chaperone
L3_063_040G1_scaffold_345_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13310..14083)
DNA (774bp) protein (258aa)
Flagellar motor rotation protein MotB n=78 Tax=Escherichia coli RepID=D6IKD1_ECOLX
hypothetical protein
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:ESA83980.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_063_040G1_scaffold_345_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14088..15434)
DNA (1347bp) protein (449aa)
Type VI secretion protein, VC_A0114 family n=16 Tax=Escherichia coli RepID=E9U844_ECOLX
Type VI secretion protein, VC_A0114 family {ECO:0000313|EMBL:ESD33694.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
hypothetical protein
L3_063_040G1_scaffold_345_14
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15437..15970)
DNA (534bp) protein (178aa)
Putative type VI secretion system protein n=1 Tax=Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str. 1121 RepID=V1GQH6_SALCE
Putative type VI secretion system protein {ECO:0000313|EMBL:ESE81347.1}; TaxID=1173950 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str.; 1121.;"
hypothetical protein
L3_063_040G1_scaffold_345_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15967..17262)
DNA (1296bp) protein (432aa)
Type VI secretion system FHA domain-containing protein n=2 Tax=Escherichia coli RepID=L4LTH7_ECOLX
hypothetical protein
Aec23 {ECO:0000313|EMBL:EGE66555.1}; TaxID=754082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_7v.;"
L3_063_040G1_scaffold_345_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17267..18316)
DNA (1050bp) protein (350aa)
Type VI secretion protein n=3 Tax=Escherichia coli RepID=E9Z235_ECOLX
hypothetical protein
Type VI secretion protein {ECO:0000313|EMBL:EGB59244.1}; TaxID=656420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M863.;"
L3_063_040G1_scaffold_345_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18280..20121)
DNA (1842bp) protein (614aa)
Type VI secretion protein n=3 Tax=Escherichia coli RepID=E9Z234_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGE66557.1}; TaxID=754082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_7v.;"
hypothetical protein
L3_063_040G1_scaffold_345_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20127..20549)
DNA (423bp) protein (141aa)
Lysozyme n=3 Tax=Escherichia coli RepID=E9Z233_ECOLX
Lysozyme {ECO:0000313|EMBL:EGB59242.1}; TaxID=656420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M863.;"
hypothetical protein
L3_063_040G1_scaffold_345_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20555..22039)
DNA (1485bp) protein (495aa)
SciI protein n=1 Tax=Escherichia coli RepID=UPI0002B8E172
hypothetical protein
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:ESA83973.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_063_040G1_scaffold_345_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22062..22559)
DNA (498bp) protein (166aa)
Aec17 n=174 Tax=Escherichia RepID=Q6TKV1_ECOLX
hypothetical protein
DewO {ECO:0000313|EMBL:AHW84561.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_063_040G1_scaffold_345_21
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23268..23786
DNA (519bp) protein (173aa)
Aec16 n=288 Tax=Escherichia RepID=Q6TKV2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC75725.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L3_063_040G1_scaffold_345_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24028..26226
DNA (2199bp) protein (733aa)
Phage-like baseplate assembly protein n=1 Tax=Escherichia coli 1.2741 RepID=I2RF45_ECOLX
Phage-like baseplate assembly protein {ECO:0000313|EMBL:EIG80880.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
hypothetical protein
L3_063_040G1_scaffold_345_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26236..27597
DNA (1362bp) protein (454aa)
Chitinase class I family protein n=3 Tax=Escherichia coli RepID=F1ZP11_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EGB61400.1}; TaxID=656420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M863.;"
hypothetical protein
L3_063_040G1_scaffold_345_24
Siccibacter turicensis, Siccibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27561..29204
DNA (1644bp) protein (548aa)
Putative uncharacterized protein n=1 Tax=Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) RepID=C9Y3H2_CROTZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBA30494.1}; TaxID=693216 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Siccibacter.;" source="Siccibacter turicensis (strain DSM 18703 / LMG 23827 / z3032); (Cronobacter turicensis).;"
L3_063_040G1_scaffold_345_25
unknown

Not on your lists

29216..29746
DNA (531bp) protein (177aa)

This feature has no annotations

L3_063_040G1_scaffold_345_26
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30007..30426
DNA (420bp) protein (140aa)
Uncharacterized protein n=7 Tax=Salmonella paratyphi A RepID=S3EJN8_SALPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD97826.1}; TaxID=54388 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella paratyphi A.;"
L3_063_040G1_scaffold_345_27
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30702..31181
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3JQV0_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:ESM38786.1}; TaxID=1329845 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae BWH 31.;"
L3_063_040G1_scaffold_345_28
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31178..31624
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=Salmonella choleraesuis RepID=N0BSR1_SALTI
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CAD02501.1}; TaxID=90370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhi.;"
Displaying 28 items

View Taxonomy