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L3_063_040G1_scaffold_374

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_374_1
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(233..937)
DNA (705bp) protein (235aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Enterobacter sp. R4-368 RepID=R9VSJ4_9ENTR
transcriptional regulator
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_374_2
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(950..1480)
DNA (531bp) protein (177aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
2''''-5'''' RNA ligase n=1 Tax=Enterobacter cloacae RepID=UPI0002DD67A0
2'-5' RNA ligase
L3_063_040G1_scaffold_374_3
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1617..4046
DNA (2430bp) protein (810aa)
RNA helicase n=1 Tax=Enterobacter cloacae RepID=UPI00030E3E9E
ATP-dependent helicase HrpB {ECO:0000313|EMBL:AHJ75202.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
RNA helicase
L3_063_040G1_scaffold_374_4
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4415..6952
DNA (2538bp) protein (846aa)
Penicillin-binding protein 1B n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IQ08_9ENTR
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
mrcB; bifunctional glycosyl transferase/transpeptidase
L3_063_040G1_scaffold_374_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7203..9470
DNA (2268bp) protein (756aa)
Ferrichrome-iron receptor FhuA n=90 Tax=Escherichia coli RepID=B1LGV3_ECOSM
fhuA; ferrichrome outer membrane transporter
Ferrichrome outer membrane transporter {ECO:0000313|EMBL:CAR11369.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_063_040G1_scaffold_374_6
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9518..10315
DNA (798bp) protein (266aa)
Iron-hydroxamate transporter ATP-binding protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VSJ9_9ENTR
iron-hydroxamate transporter ATP-binding protein
Iron-hydroxamate transporter ATP-binding protein {ECO:0000313|EMBL:AGN87231.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_374_7
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10315..11205
DNA (891bp) protein (297aa)
iron-hydroxamate transporter substrate-binding subunit n=1 Tax=Enterobacter cloacae RepID=UPI0002ED6D58
iron-hydroxamate transporter substrate-binding subunit
Iron-hydroxamate transporter substrate-binding subunit {ECO:0000313|EMBL:AHJ75199.1}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_374_8
Leclercia adecarboxylata, Leclercia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11202..13184
DNA (1983bp) protein (661aa)
Iron(3+)-hydroxamate import system permease fhuB n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SDW9_CITFR
Permease component of an ABC superfamily ferric hydroxamate transporter {ECO:0000313|EMBL:KFC91619.1}; TaxID=911008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leclercia.;" source="Leclercia adecarboxylata ATCC 23216 = NBRC 102595.;"
iron-hydroxamate transporter permease subunit
L3_063_040G1_scaffold_374_9
Enterobacter sp. 35730, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13332..14612)
DNA (1281bp) protein (427aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1619247 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35730.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3I3T0_ENTCL
L3_063_040G1_scaffold_374_10
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14806..15150
DNA (345bp) protein (115aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Enterobacter sp. R4-368 RepID=R9VSK4_9ENTR
iron-sulfur cluster insertion protein ErpA
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_374_11
Leclercia adecarboxylata, Leclercia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15200..15823)
DNA (624bp) protein (208aa)
YadS protein n=1 Tax=Enterobacter hormaechei ATCC 49162 RepID=F5RVL5_9ENTR
hypothetical protein
Putative inner membrane protein {ECO:0000313|EMBL:KFC91623.1}; TaxID=911008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leclercia.;" source="Leclercia adecarboxylata ATCC 23216 = NBRC 102595.;"
L3_063_040G1_scaffold_374_12
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15838..16638)
DNA (801bp) protein (267aa)
UPI0003A72D7E related cluster n=1 Tax=unknown RepID=UPI0003A72D7E
Vitamin B12-binding protein {ECO:0000256|HAMAP-Rule:MF_01000}; Flags: Precursor;; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
vitamin B12-transporter protein BtuF
L3_063_040G1_scaffold_374_13
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16631..17329)
DNA (699bp) protein (233aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684, ECO:0000256|SAAS:SAAS00035261}; Short=MTA/SAH nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684};; Short=MTAN {ECO:0000256|HAMAP-Rule:MF_01684};; EC=3.2.2.9 {ECO:0000256|HAMAP-Rule:MF_01684, ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
mtn; MTA/SAH nucleosidase (EC:3.2.2.16)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Enterobacter cloacae S611 RepID=V5ARF5_ENTCL
L3_063_040G1_scaffold_374_14
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17438..18952
DNA (1515bp) protein (505aa)
dgt; deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00030}; Short=dGTP triphosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00030};; Short=dGTPase {ECO:0000256|HAMAP-Rule:MF_00030};; EC=3.1.5.1 {ECO:0000256|HAMAP-Rule:MF_00030};; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
Deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VV13_9ENTR
L3_063_040G1_scaffold_374_15
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19088..20536
DNA (1449bp) protein (483aa)
serine endoprotease n=1 Tax=Enterobacter cloacae RepID=UPI00031D65FC
Protease do {ECO:0000313|EMBL:ESS57795.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
protease Do
L3_063_040G1_scaffold_374_16
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20699..21856
DNA (1158bp) protein (386aa)
CdaR family transcriptional regulator n=1 Tax=Enterobacter sp. R4-368 RepID=R9VR75_9ENTR
CdaR family transcriptional regulator
CdaR protein {ECO:0000313|EMBL:KIS41356.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
L3_063_040G1_scaffold_374_17
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21957..22346)
DNA (390bp) protein (130aa)
UPF0325 protein ESA_03178 n=12 Tax=Cronobacter RepID=Y3178_CROS8
hypothetical protein
UPF0325 protein BN128_1548 {ECO:0000256|HAMAP-Rule:MF_01519}; TaxID=1208664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 696.;"
L3_063_040G1_scaffold_374_18
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22468..23292)
DNA (825bp) protein (275aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Enterobacter cloacae RepID=UPI0003196D78
L3_063_040G1_scaffold_374_19
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23323..25998)
DNA (2676bp) protein (892aa)
protein-PII uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YMY0_9ENTR
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans UMEnt01/12.;"
L3_063_040G1_scaffold_374_20
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26182..26973)
DNA (792bp) protein (264aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VSL1_9ENTR
L3_063_040G1_scaffold_374_21
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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27351..27446
DNA (96bp) protein (32aa)
30S ribosomal protein S2 n=2 Tax=Escherichia coli RepID=T7RJY8_ECOLX
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1238219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio parahaemolyticus V-223/04.;"
Displaying 21 items

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