ggKbase home page

L3_063_040G1_scaffold_376

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_376_1
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256..798)
DNA (543bp) protein (181aa)
Protoporphyrinogen IX dehydrogenase {ECO:0000313|EMBL:EJI93220.1}; EC=1.3.5.3 {ECO:0000313|EMBL:EJI93220.1};; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
Protoporphyrinogen IX dehydrogenase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1YXX3_9ENTR
hemG; protoporphyrinogen oxidase
L3_063_040G1_scaffold_376_2
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(810..2261)
DNA (1452bp) protein (484aa)
Trk system potassium uptake protein n=2 Tax=Salmonella houtenae RepID=R0D823_SALHO
potassium transporter
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=260680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Livingstone.;"
L3_063_040G1_scaffold_376_3
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2301..2915)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Raoultella ornithinolytica B6 RepID=M9W9V8_RAOOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIZ45312.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
L3_063_040G1_scaffold_376_4
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2915..4246)
DNA (1332bp) protein (444aa)
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582};; Imidodipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; TaxID=1124963 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Muenster str. 660.;"
pepQ; proline dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase n=6 Tax=Salmonella enterica I RepID=V0G8X9_SALMS
L3_063_040G1_scaffold_376_5
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4435..6624
DNA (2190bp) protein (730aa)
fadB; multifunctional fatty acid oxidation complex subunit alpha (EC:5.3.3.8)
Fatty acid oxidation complex subunit alpha n=2 Tax=Enterobacteriaceae RepID=M9W591_RAOOR
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01621, ECO:0000256|SAAS:SAAS00051741}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
L3_063_040G1_scaffold_376_6
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6634..7797
DNA (1164bp) protein (388aa)
fadA; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01620, ECO:0000256|SAAS:SAAS00022002}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01620, ECO:0000256|SAAS:SAAS00021940};; Acetyl-CoA acyltransferase {ECO:0000256|HAMAP-Rule:MF_01620}; Beta-ketothiolase {ECO:0000256|HAMAP-Rule:MF_01620}; Fatty acid oxidation complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01620}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
3-ketoacyl-CoA thiolase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VTD6_9ENTR
L3_063_040G1_scaffold_376_7
Leminorella grimontii, Leminorella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8072..8437
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Klebsiella oxytoca RepID=V3K776_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:KFC97518.1}; TaxID=1005999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Leminorella.;" source="Leminorella grimontii ATCC 33999 = DSM 5078.;"
hypothetical protein
L3_063_040G1_scaffold_376_8
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8484..9185)
DNA (702bp) protein (234aa)
fre; FMN reductase (EC:1.16.1.3)
FMN reductase {ECO:0000313|EMBL:AGN86634.1}; EC=1.16.1.3 {ECO:0000313|EMBL:AGN86634.1};; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
FMN reductase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VNG5_9ENTR
L3_063_040G1_scaffold_376_9
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9246..10730)
DNA (1485bp) protein (495aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01636}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolytica (Klebsiella ornithinolytica).;"
3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=2 Tax=Enterobacter aerogenes RepID=G0EBM0_ENTAK
L3_063_040G1_scaffold_376_10
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10910..11398
DNA (489bp) protein (163aa)
Transcription antitermination protein RfaH n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TUZ3_CITRI
rfaH; transcriptional activator
Transcription antitermination protein RfaH {ECO:0000256|HAMAP-Rule:MF_00951}; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
L3_063_040G1_scaffold_376_11
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11406..12188)
DNA (783bp) protein (261aa)
DNase TatD n=1 Tax=Enterobacter cloacae RepID=UPI0002E07B78
DNase TatD
Tat-linked quality control protein TatD {ECO:0000256|HAMAP-Rule:MF_00901}; Deoxyribonuclease TatD {ECO:0000256|HAMAP-Rule:MF_00901}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_376_12
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12230..12994)
DNA (765bp) protein (255aa)
twin-arginine protein translocation system subunit TatC n=1 Tax=Enterobacter cloacae RepID=UPI00030E0F8C
twin-arginine protein translocation system subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
L3_063_040G1_scaffold_376_13
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12997..13521)
DNA (525bp) protein (175aa)
Sec-independent protein translocase protein TatB n=3 Tax=Escherichia fergusonii RepID=B7LTZ7_ESCF3
tatB; sec-independent translocase
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=981367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii ECD227.;"
L3_063_040G1_scaffold_376_14
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13525..13779)
DNA (255bp) protein (85aa)
Sec-independent protein translocase protein TatA n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2J081_9ENTR
preprotein translocase subunit TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radicincitans DSM 16656.;"
L3_063_040G1_scaffold_376_15
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13855..15495)
DNA (1641bp) protein (547aa)
Probable protein kinase UbiB {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063486};; Ubiquinone biosynthesis protein UbiB {ECO:0000256|HAMAP-Rule:MF_00414}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
Probable protein kinase UbiB n=1 Tax=Escherichia coli HVH 3 (4-7276001) RepID=T5M688_ECOLX
ubiB; ubiquinone biosynthesis protein UbiB
L3_063_040G1_scaffold_376_16
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15492..16097)
DNA (606bp) protein (202aa)
Membrane protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VQW5_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AGN86626.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_376_17
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16109..16864)
DNA (756bp) protein (252aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
ubiE; ubiquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2J1I8_9ENTR
L3_063_040G1_scaffold_376_18
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17109..17870)
DNA (762bp) protein (254aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
Uridine phosphorylase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0MA77_ENTBF
uridine phosphorylase
L3_063_040G1_scaffold_376_19
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18126..18938
DNA (813bp) protein (271aa)
Putative dienelactone hydrolase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2J1H8_9ENTR
LG58.unitig_0_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIS45712.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
carboxymethylenebutenolidase
L3_063_040G1_scaffold_376_20
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19012..19563)
DNA (552bp) protein (184aa)
phosphoglycerate mutase n=1 Tax=Marinobacterium stanieri RepID=UPI0002558834
Putative phosphoglycerate mutase {ECO:0000313|EMBL:GAL60452.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
phosphoglycerate mutase
L3_063_040G1_scaffold_376_21
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19554..20618)
DNA (1065bp) protein (355aa)
Beta-lactamase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B5H1_ALCFA
Uncharacterized protein {ECO:0000313|EMBL:GAL60453.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
beta-lactamase-like protein
L3_063_040G1_scaffold_376_22
Cedecea neteri, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20615..21643)
DNA (1029bp) protein (343aa)
ABC transporter family protein n=1 Tax=Enterobacter cloacae S611 RepID=V5CTT4_ENTCL
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIR03814.1}; TaxID=158822 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea neteri.;"
L3_063_040G1_scaffold_376_23
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21631..23343)
DNA (1713bp) protein (571aa)
ABC transporter permease n=1 Tax=Enterobacter sp. R4-368 RepID=R9VTB8_9ENTR
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAL60455.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
ABC transporter permease
L3_063_040G1_scaffold_376_24
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23347..24429)
DNA (1083bp) protein (361aa)
ABC transporter substrate-binding protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VNF4_9ENTR
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGN86619.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. R4-368.;"
L3_063_040G1_scaffold_376_25
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24460..25221
DNA (762bp) protein (254aa)
DeoR family transcripitonal regulator n=1 Tax=Halomonas stevensii RepID=UPI00035CA5D3
Glycerol-3-phosphate regulon transcriptional repressor {ECO:0000313|EMBL:GAL60457.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
DeoR faimly transcriptional regulator
L3_063_040G1_scaffold_376_26
Buttiauxella agrestis, Buttiauxella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25401..26591
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) RepID=A7FCD9_YERP3
Uncharacterized protein {ECO:0000313|EMBL:KFC82109.1}; TaxID=1006004 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Buttiauxella.;" source="Buttiauxella agrestis ATCC 33320.;"
hypothetical protein
Displaying 26 items

View Taxonomy