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L3_063_040G1_scaffold_380

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_380_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(534..1652)
DNA (1119bp) protein (373aa)
Nicotinate-nucleotide-dimethyl-benzimidazole phosphoribosyl transferase {ECO:0000313|EMBL:EQC65267.1}; EC=2.4.2.21 {ECO:0000313|EMBL:EQC65267.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Nicotinate-nucleotide-dimethyl-benzimidazole phosphoribosyl transferase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T2F4_9FIRM
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L3_063_040G1_scaffold_380_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1649..2686)
DNA (1038bp) protein (346aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase n=2 Tax=Veillonella parvula RepID=D1BP27_VEIPT
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L3_063_040G1_scaffold_380_3
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2810..3697)
DNA (888bp) protein (296aa)
cyclohexadienyl dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=2 Tax=Veillonella sp. 3_1_44 RepID=D6KK76_9FIRM
Prephenate dehydrogenase {ECO:0000313|EMBL:EFG23285.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L3_063_040G1_scaffold_380_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3805..5151)
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BP28_VEIPT
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ACZ25135.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_063_040G1_scaffold_380_5
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5357..6229)
DNA (873bp) protein (291aa)
Pyruvate ferredoxin oxidoreductase, beta subunit n=2 Tax=Veillonella RepID=D6KK74_9FIRM
Pyruvate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:EFG25088.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
L3_063_040G1_scaffold_380_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6231..7982)
DNA (1752bp) protein (584aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=4 Tax=Veillonella RepID=D1BP30_VEIPT
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:EGL77137.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
L3_063_040G1_scaffold_380_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8280..9065)
DNA (786bp) protein (262aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
tRNA pseudouridine synthase A n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BP31_VEIPT
tRNA pseudouridine synthase A
L3_063_040G1_scaffold_380_8
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9062..9865)
DNA (804bp) protein (268aa)
Energy-coupling factor transporter transmembrane protein EcfT n=3 Tax=Veillonella RepID=D1BP32_VEIPT
cobalt transporter
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
L3_063_040G1_scaffold_380_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9855..10715)
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
ABC transporter related protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BP33_VEIPT
ABC transporter
L3_063_040G1_scaffold_380_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10715..11623)
DNA (909bp) protein (303aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
ATPase component of general energizing module of ECF transporter n=3 Tax=Veillonella parvula RepID=T0SV16_9FIRM
cobalt ABC transporter ATPase
L3_063_040G1_scaffold_380_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(11908..12243)
DNA (336bp) protein (112aa)
50S ribosomal protein L17 n=9 Tax=Veillonella RepID=D1BP35_VEIPT
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L3_063_040G1_scaffold_380_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12256..13260)
DNA (1005bp) protein (335aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Veillonella RepID=D1BP36_VEIPT
DNA-directed RNA polymerase subunit alpha
L3_063_040G1_scaffold_380_13
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13331..13720)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=13 Tax=Veillonella RepID=D1BP37_VEIPT
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L3_063_040G1_scaffold_380_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13740..14108)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=7 Tax=Veillonella RepID=D1BP38_VEIPT
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
L3_063_040G1_scaffold_380_15
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14132..14245)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=13 Tax=Veillonella RepID=D1BP39_VEIPT
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
L3_063_040G1_scaffold_380_16
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14272..14490)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=8 Tax=Veillonella RepID=D1BP40_VEIPT
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L3_063_040G1_scaffold_380_17
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14513..15283)
DNA (771bp) protein (257aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Methionine aminopeptidase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQN0_9FIRM
methionine aminopeptidase
L3_063_040G1_scaffold_380_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15287..15850)
DNA (564bp) protein (188aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Adenylate kinase n=11 Tax=Veillonella RepID=D1BP42_VEIPT
adenylate kinase
L3_063_040G1_scaffold_380_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(15863..17125)
DNA (1263bp) protein (421aa)
Protein translocase subunit SecY n=2 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BP43_VEIPT
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L3_063_040G1_scaffold_380_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(17127..17573)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=5 Tax=Veillonella RepID=D1BP44_VEIPT
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
L3_063_040G1_scaffold_380_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(17596..17775)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=8 Tax=Veillonella RepID=D1BP45_VEIPT
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_063_040G1_scaffold_380_22
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(17790..18293)
DNA (504bp) protein (168aa)
30S ribosomal protein S5 n=8 Tax=Veillonella RepID=D1BP46_VEIPT
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L3_063_040G1_scaffold_380_23
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18312..18692)
DNA (381bp) protein (127aa)
50S ribosomal protein L18 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FNE2_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
50S ribosomal protein L18
L3_063_040G1_scaffold_380_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18710..19255)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=7 Tax=Veillonella RepID=D1BP48_VEIPT
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_063_040G1_scaffold_380_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19280..19666)
DNA (387bp) protein (129aa)
30S ribosomal protein S8 n=7 Tax=Veillonella RepID=D1BP49_VEIPT
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L3_063_040G1_scaffold_380_26
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19694..19963)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=7 Tax=Veillonella RepID=D1BP50_VEIPT
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L3_063_040G1_scaffold_380_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19980..20519)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=6 Tax=Veillonella RepID=D1BP51_VEIPT
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_063_040G1_scaffold_380_28
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20543..20863)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=11 Tax=Veillonella RepID=D1BP52_VEIPT
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
L3_063_040G1_scaffold_380_29
Veillonella sp. AS16, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20882..21250)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=9 Tax=Veillonella RepID=D1BP53_VEIPT
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=936589 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. AS16.;"
L3_063_040G1_scaffold_380_30
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(21275..21535)
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=5 Tax=Veillonella RepID=T0SV40_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
30S ribosomal protein S17
Displaying items 1-30 of 41 in total

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