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L3_063_040G1_scaffold_440

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_440_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..125)
DNA (123bp) protein (41aa)
Glutamate synthase subunit alpha n=1 Tax=Salmonella enterica subsp. enterica serovar Hadar str. ATCC 51956 RepID=V2BE07_SALHA
gltB; glutamate synthase subunit alpha
Glutamate synthase subunit alpha {ECO:0000313|EMBL:AKH08965.1}; TaxID=59201 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica I.;"
L3_063_040G1_scaffold_440_2
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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808..1749
DNA (942bp) protein (314aa)
Putative uncharacterized protein yhcC n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZH3_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33082.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
radical SAM superfamily protein
L3_063_040G1_scaffold_440_3
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1862..4198
DNA (2337bp) protein (779aa)
Aerobic respiration control two-component histidine kinase ArcB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZH4_ESCHE
Aerobic respiration control two-component histidine kinase ArcB {ECO:0000313|EMBL:GAB51132.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
aerobic respiration control sensor protein ArcB
L3_063_040G1_scaffold_440_4
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4427..5080
DNA (654bp) protein (218aa)
Isoprenoid biosynthesis protein ElbB n=2 Tax=Bacteria RepID=H5UZH5_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33080.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
elbB; isoprenoid biosynthesis protein with amidotransferase-like domain
L3_063_040G1_scaffold_440_5
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5077..5805
DNA (729bp) protein (243aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZH6_ESCHE
mtgA; peptidoglycan transglycosylase
L3_063_040G1_scaffold_440_6
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5821..6093)
DNA (273bp) protein (91aa)
ptsO; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (EC:2.7.3.9)
Phosphocarrier protein NPr n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZH7_ESCHE
Phosphocarrier protein NPr {ECO:0000313|EMBL:GAB51135.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_440_7
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6090..6944)
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein YhbJ n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZH8_ESCHE
RNase adapter protein RapZ {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_440_8
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7005..7484)
DNA (480bp) protein (160aa)
Nitrogen regulatory protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZH9_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33076.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN
L3_063_040G1_scaffold_440_9
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7568..7855)
DNA (288bp) protein (96aa)
Putative sigma-54 modulation protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI0_ESCHE
Putative sigma-54 modulation protein {ECO:0000313|EMBL:GAB51138.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
sigma(54) modulation protein
L3_063_040G1_scaffold_440_10
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7878..9311)
DNA (1434bp) protein (478aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI1_ESCHE
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
L3_063_040G1_scaffold_440_11
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9479..10204)
DNA (726bp) protein (242aa)
Lipopolysaccharide ABC transporter ATP-binding protein LptB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI2_ESCHE
Lipopolysaccharide ABC transporter ATP-binding protein LptB {ECO:0000313|EMBL:GAB51140.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
lipopolysaccharide ABC transporter ATP-binding protein
L3_063_040G1_scaffold_440_12
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10211..10768)
DNA (558bp) protein (186aa)
Lipopolysaccharide ABC transporter substrate binding protein LptA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI3_ESCHE
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
lipopolysaccharide transport periplasmic protein LptA
L3_063_040G1_scaffold_440_13
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10737..11312)
DNA (576bp) protein (192aa)
Lipopolysaccharide export system protein LptC n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI4_ESCHE
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915, ECO:0000256|PIRNR:PIRNR028513}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
lipopolysaccharide exporter periplasmic protein
L3_063_040G1_scaffold_440_14
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11309..11875)
DNA (567bp) protein (189aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.29 3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI5_ESCHE
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC {ECO:0000313|EMBL:GAB51143.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
L3_063_040G1_scaffold_440_15
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11893..12879)
DNA (987bp) protein (329aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
Arabinose 5-phosphate isomerase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI6_ESCHE
D-arabinose 5-phosphate isomerase
L3_063_040G1_scaffold_440_16
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12893..13870)
DNA (978bp) protein (326aa)
Putative uncharacterized protein yrbG n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI7_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33069.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
putative calcium/sodium:proton antiporter
L3_063_040G1_scaffold_440_17
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14102..14917
DNA (816bp) protein (272aa)
Putative phospholipid ABC transporter ATP-binding protein MlaF n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI8_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33068.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
ABC transporter ATP-binding protein YrbF
L3_063_040G1_scaffold_440_18
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14925..15707
DNA (783bp) protein (261aa)
Putative phospholipid ABC transporter permease protein MlaE n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZI9_ESCHE
Putative phospholipid ABC transporter permease protein MlaE {ECO:0000313|EMBL:GAB51147.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
organic solvent tolerance protein
L3_063_040G1_scaffold_440_19
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15711..16262
DNA (552bp) protein (184aa)
Putative phospholipid ABC transporter substrate binding periplasmic protein MlaD n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZJ0_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33066.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_440_20
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16278..16907
DNA (630bp) protein (210aa)
Putative phospholipid-binding protein periplasmic MlaC n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZJ1_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33065.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
ABC transporter substrate-binding protein
L3_063_040G1_scaffold_440_21
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16907..17209
DNA (303bp) protein (101aa)
Putative phospholipid ABC transporter substrate binding periplasmic protein MlaB n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZJ2_ESCHE
Putative phospholipid ABC transporter substrate binding periplasmic protein MlaB {ECO:0000313|EMBL:GAB51150.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
phospholipid ABC transporter substrate-binding protein
L3_063_040G1_scaffold_440_22
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17337..17591
DNA (255bp) protein (85aa)
Putative uncharacterized protein yrbA n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZJ3_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33063.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
L3_063_040G1_scaffold_440_23
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17643..18902
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZJ4_ESCHE
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_063_040G1_scaffold_440_24
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18971..19234)
DNA (264bp) protein (88aa)
Sugar fermentation stimulation protein B n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZJ5_ESCHE
Sugar fermentation stimulation protein B {ECO:0000313|EMBL:GAB51153.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
DNA-binding transcriptional regulator Nlp
L3_063_040G1_scaffold_440_25
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19440..20411)
DNA (972bp) protein (324aa)
Octaprenyl-diphosphate synthase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZJ6_ESCHE
Enterobacter aerogenes strain DDE1 c8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU33249.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
octaprenyl diphosphate synthase
L3_063_040G1_scaffold_440_26
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20671..20907
DNA (237bp) protein (79aa)
50S ribosomal protein L21 n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UZJ7_ESCHE
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
rplU; 50S ribosomal protein L21
Displaying 26 items

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