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L3_063_040G1_scaffold_445

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_063_040G1_scaffold_445_1
Pantoea dispersa, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..226
DNA (225bp) protein (75aa)
30S ribosomal protein S21 n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1TCP8_9ENTR
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1358411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea dispersa EGD-AAK13.;"
SSU ribosomal protein S21P
L3_063_040G1_scaffold_445_2
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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342..2087
DNA (1746bp) protein (582aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=290338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696).;"
DNA primase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8APV8_CITK8
dnaG; DNA primase
L3_063_040G1_scaffold_445_3
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2242..4086
DNA (1845bp) protein (615aa)
RNA polymerase sigma factor RpoD n=2 Tax=Enterobacter aerogenes RepID=G0E2X7_ENTAK
RNA polymerase sigma factor RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1400138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes UCI 15.;"
L3_063_040G1_scaffold_445_4
Kluyvera ascorbata, Kluyvera, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4200..4706)
DNA (507bp) protein (169aa)
G:T/U mismatch-specific uracil/thymine DNA-glycosylase {ECO:0000313|EMBL:KFD05125.1}; EC=3.2.2.- {ECO:0000313|EMBL:KFD05125.1};; EC=3.2.2.28 {ECO:0000313|EMBL:KFD05125.1};; TaxID=1006000 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kluyvera.;" source="Kluyvera ascorbata ATCC 33433.;"
G/U mismatch-specific DNA glycosylase n=3 Tax=Citrobacter RepID=J0VT94_9ENTR
G:T/U mismatch-specific DNA glycosylase
L3_063_040G1_scaffold_445_5
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5368..5778
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Plautia stali symbiont RepID=U3U0B5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDN02286.1}; TaxID=1463165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp. 18A069.;"
hypothetical protein
L3_063_040G1_scaffold_445_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5834..7009)
DNA (1176bp) protein (392aa)
Late gene regulator n=2 Tax=Salmonella muenster RepID=V1WQ86_SALMS
Gene D protein {ECO:0000313|EMBL:AKE60955.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
late gene regulator
L3_063_040G1_scaffold_445_7
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7012..7476)
DNA (465bp) protein (155aa)
Tail fiber protein n=1 Tax=Salmonella enterica subsp. enterica serovar Eastbourne str. CFSAN001084 RepID=V2KEP8_SALET
Tail fiber protein {ECO:0000313|EMBL:ESJ24903.1}; TaxID=1194158 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Eastbourne str.; CFSAN001084.;"
tail fiber protein
L3_063_040G1_scaffold_445_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7488..9917)
DNA (2430bp) protein (810aa)
Predicted tail length tape measure protein n=13 Tax=Escherichia coli RepID=B7UH50_ECO27
tail length tape measure protein
Phage tail tape measure protein, TP901 family, core region {ECO:0000313|EMBL:EHU41205.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L3_063_040G1_scaffold_445_9
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10062..10343)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI00037C4942
Tail protein {ECO:0000313|EMBL:ESJ24900.1}; TaxID=1194158 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Eastbourne str.; CFSAN001084.;"
tail protein
L3_063_040G1_scaffold_445_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10406..10924)
DNA (519bp) protein (173aa)
Predicted tail tube protein n=15 Tax=Escherichia coli RepID=B7UH48_ECO27
tail tube protein
Major tail tube protein {ECO:0000313|EMBL:EGP24083.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
L3_063_040G1_scaffold_445_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10937..12124)
DNA (1188bp) protein (396aa)
Tail sheath protein n=3 Tax=Salmonella enterica I RepID=V1WLC6_SALMS
Tail sheath protein {ECO:0000313|EMBL:KJC08552.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tail sheath protein
L3_063_040G1_scaffold_445_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12189..12767)
DNA (579bp) protein (193aa)
DNA-invertase n=2 Tax=Escherichia coli RepID=F7MZP4_ECOLX
DNA-invertase {ECO:0000313|EMBL:EGP24081.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
DNA-invertase
L3_063_040G1_scaffold_445_13
unknown

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12909..13115
DNA (207bp) protein (69aa)

This feature has no annotations

L3_063_040G1_scaffold_445_14
unknown

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13119..13418
DNA (300bp) protein (100aa)

This feature has no annotations

L3_063_040G1_scaffold_445_15
Yersinia intermedia, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13434..13664
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8ND10_RALSL
caudovirales tail fiber assembly family protein
Caudovirales tail fiber assembly family protein {ECO:0000313|EMBL:AJJ19697.1}; TaxID=631 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia intermedia.;"
L3_063_040G1_scaffold_445_16
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13642..14232)
DNA (591bp) protein (197aa)
PREDICTED: tail fiber assembly protein-like n=1 Tax=Cucumis sativus RepID=UPI0002B444BB
Tail fiber assembly protein {ECO:0000313|EMBL:ESF67188.1}; TaxID=1124967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Soerenga str. 695.;"
tail assembly chaperone gp38
L3_063_040G1_scaffold_445_17
Hafnia alvei, Hafnia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14232..15305)
DNA (1074bp) protein (358aa)
Phage Tail Collar domain protein n=3 Tax=Escherichia coli RepID=K5GKT6_ECOLX
phage tail protein
Phage tail protein {ECO:0000313|EMBL:AIU74082.1}; TaxID=1453496 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Hafnia.;" source="Hafnia alvei FB1.;"
L3_063_040G1_scaffold_445_18
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15302..15913)
DNA (612bp) protein (204aa)
Bacteriophage P2-related tail formation protein n=3 Tax=Escherichia coli RepID=F7N5B2_ECOLX
Tail protein {ECO:0000313|EMBL:AKE60944.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
putative phage tail protein
L3_063_040G1_scaffold_445_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15906..16814)
DNA (909bp) protein (303aa)
Baseplate assembly protein J n=3 Tax=Escherichia coli RepID=F7N5B1_ECOLX
Putative baseplate J-like protein {ECO:0000313|EMBL:EIH12952.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
putative phage baseplate assembly protein J
L3_063_040G1_scaffold_445_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16819..17166)
DNA (348bp) protein (116aa)
Baseplate assembly protein W n=4 Tax=Enterobacteriaceae RepID=F7N5B0_ECOLX
Putative lysozyme {ECO:0000313|EMBL:EIH12727.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
putative prophage baseplate protein
L3_063_040G1_scaffold_445_21
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17163..17804)
DNA (642bp) protein (214aa)
Baseplate assembly protein V n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 RepID=J0BDI1_SALNE
Baseplate assembly protein V
Baseplate assembly protein {ECO:0000313|EMBL:AJB06469.1}; TaxID=796730 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Newport str. CVM 22425.;"
L3_063_040G1_scaffold_445_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17879..18622)
DNA (744bp) protein (248aa)
Uncharacterized protein n=3 Tax=Yersinia enterocolitica RepID=N1JX51_YEREN
Uncharacterized protein {ECO:0000313|EMBL:KJC08558.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_063_040G1_scaffold_445_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18636..19091)
DNA (456bp) protein (152aa)
Phage virion morphogenesis protein n=2 Tax=Salmonella muenster RepID=V1WYB0_SALMS
Tail protein {ECO:0000313|EMBL:KJC08559.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
phage virion morphogenesis protein
L3_063_040G1_scaffold_445_24
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19088..19504)
DNA (417bp) protein (139aa)
P2 phage tail completion protein R n=2 Tax=Salmonella muenster RepID=V1WQ98_SALMS
Tail fiber protein {ECO:0000313|EMBL:AKE60938.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Tail completion protein R
L3_063_040G1_scaffold_445_25
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19612..20025)
DNA (414bp) protein (138aa)
Phage lysis regulatory protein n=1 Tax=Salmonella enterica subsp. enterica serovar Eastbourne str. CFSAN001084 RepID=V2JHL1_SALET
Phage lysis regulatory protein {ECO:0000313|EMBL:ESJ24889.1}; TaxID=1194158 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Eastbourne str.; CFSAN001084.;"
Protein lysB
L3_063_040G1_scaffold_445_26
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20022..20456)
DNA (435bp) protein (145aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=796730 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Newport str. CVM 22425.;"
Lysozyme n=8 Tax=Salmonella enterica I RepID=B4T032_SALNS
Lysozyme
Displaying 26 items

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